RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 MARCH4Q9P2E8 410 aaPredicted RBP14.96□□□□□ -0.01
RTN3-205ENST00000356000 SF3B6Q9Y3B4 125 aaKnown RBP14.96□□□□□ -0.01
RTN3-205ENST00000356000 DMRT1Q9Y5R6 373 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 LOC390937A0A1W2PQ73 354 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 A8MVJ9 347 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 CASKO14936 926 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 TREHO43280 583 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 URODP06132 367 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 EFNA5P52803 228 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 CLDN8P56748 225 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 RPS25P62851 125 aaKnown RBP14.96□□□□□ -0.02
RTN3-205ENST00000356000 RPL38P63173 70 aaKnown RBP14.96□□□□□ -0.02
RTN3-205ENST00000356000 KCNJ10P78508 379 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 DCDP81605 110 aaKnown RBP14.96□□□□□ -0.02
RTN3-205ENST00000356000 CRTC2Q53ET0 693 aaPredicted RBP14.96□□□□□ -0.02
RTN3-205ENST00000356000 PAQR6Q6TCH4 344 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 ABHD15Q6UXT9 468 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 ACOT1Q86TX2 421 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 SERINC5Q86VE9 423 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 PUSL1Q8N0Z8 303 aaKnown RBP14.96□□□□□ -0.02
RTN3-205ENST00000356000 KRTCAP2Q8N6L1 136 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 ZNF527Q8NB42 609 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 TRPV1Q8NER1 839 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 TMIEQ8NEW7 156 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 OR52B6Q8NGF0 335 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 C1GALT1C1Q96EU7 318 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 OSMRQ99650 979 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 WDR77Q9BQA1 342 aaPredicted RBP14.96□□□□□ -0.02
RTN3-205ENST00000356000 PDCD2LQ9BRP1 358 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 ATXN3LQ9H3M9 355 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 MFSD1Q9H3U5 465 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 EXOSC3Q9NQT5 275 aaKnown RBP14.96□□□□□ -0.02
RTN3-205ENST00000356000 ENAMQ9NRM1 1142 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 CCL27Q9Y4X3 112 aa14.96□□□□□ -0.02
RTN3-205ENST00000356000 A0A1B0GW55 424 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 OR6C68A6NDL8 312 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 C5orf52A6NGY3 159 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 ZAR1LA6NP61 321 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 VEGFDO43915 354 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 OAZ2O95190 189 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 HPXP02790 462 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 DUX4L2P0CJ85 424 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 DUX4L3P0CJ86 424 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 DUX4L4P0CJ87 422 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 DUX4L5P0CJ88 424 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 DUX4L6P0CJ89 424 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 DUX4L7P0CJ90 424 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 PPP3CBP16298 524 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 ELK1P19419 428 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 FGF9P31371 208 aaPredicted RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 RPL34P49207 117 aaKnown RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 UBXN2BQ14CS0 331 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 MPPE1Q53F39 396 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 HACD4Q5VWC8 232 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 DOK6Q6PKX4 331 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 USP30Q70CQ3 517 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 TSEN54Q7Z6J9 526 aaKnown RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 CBLN2Q8IUK8 224 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 GPR65Q8IYL9 337 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 OR4C15Q8NGM1 316 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 NT5C3BQ969T7 300 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 TRIM43Q96BQ3 446 aaPredicted RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 PEX11GQ96HA9 241 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 MAPKAP1Q9BPZ7 522 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 DERL2Q9GZP9 239 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 SPRTNQ9H040 489 aaPredicted RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 SLC6A20Q9NP91 592 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 EXTL2Q9UBQ6 330 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 DUX4Q9UBX2 424 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 BACE2Q9Y5Z0 518 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 A0A0G2JMZ2 1700 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 LRRC37A2A6NM11 1700 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 CHURC1-FNTBB4DL54 471 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 SUSD5O60279 629 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 IGHA2P01877 340 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 CHRM5P08912 532 aaPredicted RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 WARSP23381 471 aaKnown RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 DDX6P26196 483 aaKnown RBP eCLIP14.95□□□□□ -0.02
RTN3-205ENST00000356000 MST1P26927 711 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 ACTR1BP42025 376 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 CCINQ13939 588 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 CCL15Q16663 113 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 ACER2Q5QJU3 275 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 FAM109BQ6ICB4 259 aaPredicted RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 ATPAF2Q8N5M1 289 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 GPR26Q8NDV2 337 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 PXT1Q8NFP0 134 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 LCORQ96JN0 433 aaPredicted RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 INPP5KQ9BT40 448 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 FSD1LQ9BXM9 530 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 MROH8Q9H579 483 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 NSUN3Q9H649 340 aaKnown RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 ELAC1Q9H777 363 aaKnown RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 RPF1Q9H9Y2 349 aaKnown RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 ZNF624Q9P2J8 865 aaPredicted RBP14.95□□□□□ -0.02
RTN3-205ENST00000356000 GHRLQ9UBU3 117 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 SLC9A8Q9Y2E8 581 aa14.95□□□□□ -0.02
RTN3-205ENST00000356000 GPR31O00270 319 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 TERTO14746 1132 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms