RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CYB5R2Q6BCY4 276 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 CORO6Q6QEF8 472 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 B3GNT8Q7Z7M8 397 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 HBEGFQ99075 208 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 EIF2B4Q9UI10 523 aaKnown RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF225Q9UK10 706 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 PNMA8CA0A1B0GUJ8 204 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 STK25O00506 426 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 BCKDKO14874 412 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 GUCA1CO95843 209 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 CATP04040 527 aaKnown RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 SYPP08247 313 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 HIST1H2AGP0C0S8 130 aaPredicted RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 TDGF1P13385 188 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 HIST1H2ADP20671 130 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 TNFSF8P32971 234 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 GZMKP49863 264 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 DIO3P55073 304 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 ISL1P61371 349 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 TATDN3Q17R31 274 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 TTC23Q5W5X9 447 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 MBOAT1Q6ZNC8 495 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 GOLGA7Q7Z5G4 137 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 P3H2Q8IVL5 708 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 SLC22A18ASQ8N1D0 253 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 CYP4Z2PQ8N1L4 340 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 OR1E3Q8WZA6 343 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 LRRC58Q96CX6 371 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 MTERF3Q96E29 417 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 HIST1H2AHQ96KK5 128 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF382Q96SR6 550 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 HIST1H2AJQ99878 128 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 H2AFJQ9BTM1 129 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 TRIM45Q9H8W5 580 aaPredicted RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 CARS2Q9HA77 564 aaKnown RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 ARL15Q9NXU5 204 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF639Q9UID6 485 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 NDUFAF1Q9Y375 327 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF175Q9Y473 711 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 EML5Q05BV3 1969 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 CCDC163A0A0D9SF12 145 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 LINC00032P0C843 101 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 ERP29P30040 261 aaKnown RBP9.58□□□□□ -0.88
SYNE1-203ENST00000354674 ARMCX4Q5H9R4 360 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 PAGE3Q5JUK9 113 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 Q6ZSR6 202 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 LAX1Q8IWV1 398 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 ZNF680Q8NEM1 530 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 SKA2Q8WVK7 121 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-203ENST00000354674 ESAMQ96AP7 390 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 TEX37Q96LM6 180 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 FRMD6Q96NE9 622 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 EGFL8Q99944 293 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 YTHDF1Q9BYJ9 559 aaKnown RBP9.58□□□□□ -0.88
SYNE1-203ENST00000354674 RACGAP1Q9H0H5 632 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 C11orf54Q9H0W9 315 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-203ENST00000354674 ACOT13Q9NPJ3 140 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 PRMT8Q9NR22 394 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-203ENST00000354674 KLF15Q9UIH9 416 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 EDARQ9UNE0 448 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 RNF6Q9Y252 685 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 A0A1B0GTL3 188 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 TCRBV16S1A1N1A0A5B0 115 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 AQP12BA6NM10 295 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 TTLL8A6PVC2 850 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 OR7A17O14581 309 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 TO15178 435 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 WBP4O75554 376 aaKnown RBP9.58□□□□□ -0.88
SYNE1-203ENST00000354674 NTRK1P04629 796 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 CD27P26842 260 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 HSPA7P48741 367 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 PXNP49023 591 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-203ENST00000354674 MRPL28Q13084 256 aaKnown RBP9.58□□□□□ -0.88
SYNE1-203ENST00000354674 GTF2H2Q13888 395 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 SQLEQ14534 574 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 UGT8Q16880 541 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 KANK2Q63ZY3 851 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 GTF2H2CQ6P1K8 395 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 LRRC70Q7Z2Q7 622 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 AQP12AQ8IXF9 295 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 CHCHD4Q8N4Q1 142 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 ENKURQ8TC29 256 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 NSMCE2Q96MF7 247 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 OR2M4Q96R27 311 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 PKP4Q99569 1192 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 SLC32A1Q9H598 525 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 WWOXQ9NZC7 414 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 NLKQ9UBE8 527 aa9.58□□□□□ -0.88
SYNE1-203ENST00000354674 PRSS44E7EML9 344 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 H0YAE9 185 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 PLOD3O60568 738 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 STK16O75716 305 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 PDGFBP01127 241 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ITGA2P17301 1181 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 EPORP19235 508 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 MAPRE2Q15555 327 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 CCSMST1Q4G0I0 132 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 TOR1AIP1Q5JTV8 583 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ENPP7Q6UWV6 458 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 WASH2PQ6VEQ5 465 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms