RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PPP1R16AQ96I34 528 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 TEFMQ96QE5 360 aaKnown RBP18.51■□□□□ 0.55
COL13A1-201ENST00000354547 FNDC11Q9BVV2 318 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 NEUROD4Q9HD90 331 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 EQTNQ9NQ60 294 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 CFL2Q9Y281 166 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 KLHL20Q9Y2M5 609 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 A0A1W2PS29 197 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 SLC35G4P0C7Q5 338 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 NCBP2P52298 156 aaKnown RBP eCLIP18.51■□□□□ 0.55
COL13A1-201ENST00000354547 NDUFAF5Q5TEU4 345 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 LINC01555Q8NAE3 123 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 JPH3Q8WXH2 748 aaPredicted RBP18.51■□□□□ 0.55
COL13A1-201ENST00000354547 RGMAQ96B86 450 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 SLC35G5Q96KT7 338 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 C12orf66Q96MD2 445 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 SLC6A18Q96N87 628 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 TRMT61BQ9BVS5 477 aaKnown RBP18.51■□□□□ 0.55
COL13A1-201ENST00000354547 GLIPR2Q9H4G4 154 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 MGAT4BQ9UQ53 548 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 NR4A2P43354 598 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 DAB2P98082 770 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 DPTQ07507 201 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 ILKQ13418 452 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 LASP1Q14847 261 aaKnown RBP18.5■□□□□ 0.55
COL13A1-201ENST00000354547 UBE3DQ7Z6J8 389 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 TMIEQ8NEW7 156 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 GPR151Q8TDV0 419 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 BBS4Q96RK4 519 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 SLC25A19Q9HC21 320 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 KCNK6Q9Y257 313 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 IRAK3Q9Y616 596 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 EFCAB14O75071 495 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 HBQ1P09105 142 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 CXCR2P25025 360 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 CSTF2P33240 577 aaKnown RBP eCLIP18.5■□□□□ 0.55
COL13A1-201ENST00000354547 BMPR1AP36894 532 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 IL12RB1P42701 662 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 MAGEA8P43361 318 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 GSTM5P46439 218 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 PCBP4P57723 403 aaKnown RBP18.5■□□□□ 0.55
COL13A1-201ENST00000354547 CDK3Q00526 305 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 MLLT1Q03111 559 aaPredicted RBP18.5■□□□□ 0.55
COL13A1-201ENST00000354547 SLC30A8Q8IWU4 369 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 SLC30A2Q9BRI3 323 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 BARHL1Q9BZE3 327 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 MBNL1Q9NR56 388 aaKnown RBP18.5■□□□□ 0.55
COL13A1-201ENST00000354547 GPR52Q9Y2T5 361 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 MYO9BQ13459 2157 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 DSPPQ9NZW4 1301 aa18.5■□□□□ 0.55
COL13A1-201ENST00000354547 SLC15A1P46059 708 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 CDC20Q12834 499 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 GINS1Q14691 196 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 FAM46CQ5VWP2 391 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 SHFQ7M4L6 423 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 CCDC116Q8IYX3 515 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 OR6T1Q8NGN1 323 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 GPA33Q99795 319 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 FBXW2Q9UKT8 454 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 PLEKHM1Q9Y4G2 1056 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 FAAHO00519 579 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 MYL12BO14950 172 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 ASNA1O43681 348 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 PDE9AO76083 593 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 MMP11P24347 488 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 PSMA1P25786 263 aaKnown RBP18.49■□□□□ 0.55
COL13A1-201ENST00000354547 LIMK1P53667 647 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 TEKQ02763 1124 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 MAP4K2Q12851 820 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 KRT33BQ14525 404 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 WSCD2Q2TBF2 565 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 GPAT3Q53EU6 434 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 SLX4IPQ5VYV7 408 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 ACSM5Q6NUN0 579 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 ZNF765Q7L2R6 523 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 OR4K5Q8NGD3 323 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 OR8K5Q8NH50 307 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 TRNT1Q96Q11 434 aaKnown RBP18.49■□□□□ 0.55
COL13A1-201ENST00000354547 RHBGQ9H310 441 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 P2RX2Q9UBL9 471 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 A4GNTQ9UNA3 340 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 KIAA1549LQ6ZVL6 1849 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 PAK4O96013 591 aaPredicted RBP18.49■□□□□ 0.55
COL13A1-201ENST00000354547 SCG5P05408 212 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 LTBP2Q14767 1821 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 TAB1Q15750 504 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 USP30Q70CQ3 517 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 ZER1Q7Z7L7 766 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 ETFBKMTQ8IXQ9 262 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 SMG7Q92540 1137 aaKnown RBP18.49■□□□□ 0.55
COL13A1-201ENST00000354547 C16orf58Q96GQ5 468 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 LRR1Q96L50 414 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 SDHCQ99643 169 aaPredicted RBP18.49■□□□□ 0.55
COL13A1-201ENST00000354547 SMURF1Q9HCE7 757 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 SCN3AQ9NY46 2000 aa18.49■□□□□ 0.55
COL13A1-201ENST00000354547 YARS2Q9Y2Z4 477 aaKnown RBP18.49■□□□□ 0.55
COL13A1-201ENST00000354547 A0A1W2PPV9 198 aa18.48■□□□□ 0.55
COL13A1-201ENST00000354547 OR52A4PA6NMU1 304 aa18.48■□□□□ 0.55
COL13A1-201ENST00000354547 PGRMC2O15173 223 aa18.48■□□□□ 0.55
COL13A1-201ENST00000354547 RCVRNP35243 200 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms