RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 GANABQ14697 944 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 ZNF484Q5JVG2 852 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SHFQ7M4L6 423 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 DDX53Q86TM3 631 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 CRYBG2Q8N1P7 616 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 AVL9Q8NBF6 648 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SUMF2Q8NBJ7 301 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SORCS1Q8WY21 1168 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SLC39A7Q92504 469 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TMEM159Q96B96 161 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 BSCL2Q96G97 398 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 ZNF300Q96RE9 604 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 HERPUD2Q9BSE4 406 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 DUSP26Q9BV47 211 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TNKS2Q9H2K2 1166 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 HMX1Q9NP08 348 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 DIMT1Q9UNQ2 313 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 BAZ2AQ9UIF9 1905 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 DOCK11Q5JSL3 2073 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TTC24A2A3L6 582 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 SMIM30A4D0T7 59 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 FAAHO00519 579 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ST8SIA5O15466 376 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 OR6A2O95222 327 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 FHP07954 510 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 VEGFAP15692 232 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 LPOP22079 712 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 SOX3P41225 446 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 AVPR1BP47901 424 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 GIPRP48546 466 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 MANFP55145 182 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 SEC61A1P61619 476 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 TTLL4Q14679 1199 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 GTDC1Q4AE62 458 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SEZ6Q53EL9 994 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 GPR139Q6DWJ6 353 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TMEM205Q6UW68 189 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 CLEC9AQ6UXN8 241 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ZNF705AQ6ZN79 300 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 MFSD4AQ8N468 514 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 EID2Q8N6I1 236 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TRMT10AQ8TBZ6 339 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 YIPF5Q969M3 257 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 YIPF6Q96EC8 236 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 WIF1Q9Y5W5 379 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 NPC1O15118 1278 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ADAM11O75078 769 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SIX6O95475 246 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TCRBP04435 133 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 GLAP06280 429 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 PKMP14618 531 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 CPT2P23786 658 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 GABRA5P31644 462 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 GTF2A2P52657 109 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 BCL2L1Q07817 233 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 HSD17B13Q7Z5P4 300 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 GPAT4Q86UL3 456 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ZNF280BQ86YH2 543 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 PPP1R13LQ8WUF5 828 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 FKBP10Q96AY3 582 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ST6GAL2Q96JF0 529 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 PRMT6Q96LA8 375 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 MICU1Q9BPX6 476 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SLIRPQ9GZT3 109 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 PSORS1C1Q9UIG5 152 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 PSAT1Q9Y617 370 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 PARP4Q9UKK3 1724 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 CASC3O15234 703 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 MAGEB4O15481 346 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 BNIP3LO60238 219 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 AHSGP02765 367 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TUBG1P23258 451 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ADH7P40394 386 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SLC1A3P43003 542 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 NUMBP49757 651 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 CLCNKBP51801 687 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SLC35A2P78381 396 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 INCA1Q0VD86 236 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 LAPTM4AQ15012 233 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ZNF630Q2M218 657 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 PTCHD3Q3KNS1 767 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 C6orf136Q5SQH8 315 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 AGMOQ6ZNB7 445 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TXNRD3Q86VQ6 643 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 FATE1Q969F0 183 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 CPNE4Q96A23 557 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 PYCR2Q96C36 320 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 L3HYPDHQ96EM0 354 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 LIN37Q96GY3 246 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 SPATA33Q96N06 139 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TTPALQ9BTX7 342 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 REPIN1Q9BWE0 567 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 GPR88Q9GZN0 384 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 OR51M1Q9H341 326 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 NOX3Q9HBY0 568 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 OR1I1O60431 355 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 HEXBP07686 556 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 FGF4P08620 206 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 C21orf33P30042 268 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 GUCA1AP43080 201 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms