RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CD200R1Q8TD46 325 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 CRB3Q9BUF7 120 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 PRDM9Q9NQV7 894 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 ACER3Q9NUN7 267 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 NUDT4Q9NZJ9 180 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 FZD4Q9ULV1 537 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 COL16A1Q07092 1604 aaPredicted RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 PMS2P1A4D2B8 440 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 ANKDD1BA6NHY2 528 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 HEPACAM2A8MVW5 462 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 LOC730098B7Z3J9 87 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 MANBAO00462 879 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 RASGRP1O95267 797 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 CXCL14O95715 111 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 PRMT2P55345 433 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 SSTP61278 116 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 SNRPGP62308 76 aaKnown RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 BCL2L1Q07817 233 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 TAF1AQ15573 450 aaPredicted RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 TSC22D1Q15714 1073 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 IDNKQ5T6J7 187 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 METTL11BQ5VVY1 283 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 RBMS3Q6XE24 437 aaKnown RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 MARCH9Q86YJ5 346 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 LRRC52Q8N7C0 313 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 TRPV1Q8NER1 839 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 ACPTQ9BZG2 426 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 ELAC1Q9H777 363 aaKnown RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 TBC1D17Q9HA65 648 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 NMNAT1Q9HAN9 279 aaPredicted RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 BTNL2Q9UIR0 455 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 OTOFQ9HC10 1997 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 NYNRINQ9P2P1 1898 aaKnown RBP12.58□□□□□ -0.39
IFT88-202ENST00000351808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 STK25O00506 426 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 PEX11BO96011 259 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 PKMP14618 531 aaKnown RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 NFYAP23511 347 aaPredicted RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 PTAFRP25105 342 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 IRS1P35568 1242 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 KCNJ5P48544 419 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 ZNF124Q15973 351 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 CPSF6Q16630 551 aaKnown RBP eCLIP12.58□□□□□ -0.4
IFT88-202ENST00000351808 SLC36A2Q495M3 483 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 HECTD3Q5T447 861 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 MARC1Q5VT66 337 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 DEF8Q6ZN54 512 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 FGD2Q7Z6J4 655 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 C12orf45Q8N5I9 185 aaPredicted RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 NEIL3Q8TAT5 605 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 WDR89Q96FK6 387 aaPredicted RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 OR4K3Q96R72 315 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 ABHD1Q96SE0 405 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 ZNF251Q9BRH9 671 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 TMED9Q9BVK6 235 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 TPT1P8Q9HAU6 139 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 ELOVL2Q9NXB9 296 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 ASIC5Q9NY37 505 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 SEC14L3Q9UDX4 400 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 MCRIP1C9JLW8 97 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 ZNF593O00488 134 aaPredicted RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 TAPBPO15533 448 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 SLC19A2O60779 497 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 CD3GP09693 182 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 C1SP09871 688 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 SPP1P10451 314 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 SDC1P18827 310 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 SLC6A4P31645 630 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 CHI3L1P36222 383 aaPredicted RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 WNT4P56705 351 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 FKBP1AP62942 108 aaKnown RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 TTLL4Q14679 1199 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 MELKQ14680 651 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 ZRANB3Q5FWF4 1079 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 HAGHLQ6PII5 290 aaPredicted RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 Q6ZTK2 550 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 ARMCX2Q7L311 632 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 MICALL2Q8IY33 904 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 CELF5Q8N6W0 485 aaKnown RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 TCEAL3Q969E4 200 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 NARS2Q96I59 477 aaKnown RBP12.58□□□□□ -0.4
IFT88-202ENST00000351808 OSER1Q9NX31 292 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 HACL1Q9UJ83 578 aa12.58□□□□□ -0.4
IFT88-202ENST00000351808 FFAR2O15552 330 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 GADD45GO95257 159 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 IFNA4P05014 189 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 HMBSP08397 361 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 NR2F6P10588 404 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 HLA-DPA1P20036 260 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 PVALBP20472 110 aaPredicted RBP12.57□□□□□ -0.4
IFT88-202ENST00000351808 FGF9P31371 208 aaPredicted RBP12.57□□□□□ -0.4
IFT88-202ENST00000351808 SOX18P35713 384 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 RENBPP51606 427 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 SIM1P81133 766 aaPredicted RBP12.57□□□□□ -0.4
IFT88-202ENST00000351808 TPBGQ13641 420 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 IFI44LQ53G44 452 aa12.57□□□□□ -0.4
IFT88-202ENST00000351808 PRAMEF18Q5VWM3 479 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms