RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 R3HDMLQ9H3Y0 253 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 PRODH2Q9UF12 536 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 GPR52Q9Y2T5 361 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 HSPB11Q9Y547 144 aa15.27■□□□□ 0.04
PTPN11-201ENST00000351677 IFNA7P01567 189 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 ADH7P40394 386 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 RGRP47804 291 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 CDKL1Q00532 357 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 PLGLB1Q02325 96 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 TMEM35AQ53FP2 167 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 THOC7Q6I9Y2 204 aaKnown RBP15.27■□□□□ 0.03
PTPN11-201ENST00000351677 PAQR9Q6ZVX9 377 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 FAM217AQ8IXS0 508 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 SLC44A3Q8N4M1 653 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 OR7G3Q8NG95 312 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 CASD1Q96PB1 797 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 NELL2Q99435 816 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 MCCC2Q9HCC0 563 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 CSNK1G1Q9HCP0 422 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 PCDHGA3Q9Y5H0 932 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 A0A1W2PPL8 197 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 PIM1P11309 404 aaPredicted RBP15.27■□□□□ 0.03
PTPN11-201ENST00000351677 CNR2P34972 360 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 NDUFAF5Q5TEU4 345 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 TMEM151AQ8N4L1 468 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 OR56A3Q8NH54 315 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 ZNF304Q9HCX3 659 aa15.27■□□□□ 0.03
PTPN11-201ENST00000351677 NOP16Q9Y3C1 178 aaKnown RBP15.27■□□□□ 0.03
PTPN11-201ENST00000351677 LRRN3E7EW58 273 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 EEF1E1O43324 174 aaKnown RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 SLC19A2O60779 497 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 GADD45AP24522 165 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 PYCR1P32322 319 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 GJA8P48165 433 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 GAS6Q14393 721 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 KIAA0319Q5VV43 1072 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 HSD11B1LQ7Z5J1 315 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 ZBTB8BQ8NAP8 495 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 RFT1Q96AA3 541 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 CCDC120Q96HB5 630 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 KLF16Q9BXK1 252 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 ANKRD60Q9BZ19 345 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 LRRN3Q9H3W5 708 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 C13orf42A0A1B0GVH6 325 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 OXSR1O95747 527 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 SCGB1D2O95969 90 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 CASRP41180 1078 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 MAD2L1BPQ15013 274 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 UNC5DQ6UXZ4 953 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 SHDQ96IW2 340 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 BIRC8Q96P09 236 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 SRA1Q9HD15 236 aaKnown RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 MAFFQ9ULX9 164 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 PORP16435 677 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 IL1RNP18510 177 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 AK4P27144 223 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 GDI2P50395 445 aaKnown RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 TSPYL5Q86VY4 417 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-201ENST00000351677 HDHD5Q9BXW7 423 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 PCDHGB6Q9Y5F9 930 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 A0A1B0GVI7 797 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 INMT-MINDY4F8WBC2 141 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 DCTP40126 519 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 OR52E8Q6IFG1 317 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 MSANTD1Q6ZTZ1 278 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 TMEM174Q8WUU8 243 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 MSLNLQ96KJ4 702 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 LOC285095A0A1B0GVY8 99 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 PCP4L1A6NKN8 68 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 MUSKO15146 869 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 DCKP27707 260 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 BMPR1AP36894 532 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 NFATC3Q12968 1075 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 HSD17B12Q53GQ0 312 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 TCEAL8Q8IYN2 117 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 NXPE2Q96DL1 559 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 RBP7Q96R05 134 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 VNN3Q9NY84 501 aa15.26■□□□□ 0.03
PTPN11-201ENST00000351677 CDC40O60508 579 aaKnown RBP eCLIP15.25■□□□□ 0.03
PTPN11-201ENST00000351677 SDC1P18827 310 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 NDUFV2P19404 249 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 ZNF761Q86XN6 746 aaPredicted RBP15.25■□□□□ 0.03
PTPN11-201ENST00000351677 FAM86B1Q8N7N1 296 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 THAP4Q8WY91 577 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 USP3Q9Y6I4 520 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 RBM34P42696 430 aaKnown RBP15.25■□□□□ 0.03
PTPN11-201ENST00000351677 PSMA6P60900 246 aaKnown RBP15.25■□□□□ 0.03
PTPN11-201ENST00000351677 LRP8Q14114 963 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 CMPK2Q5EBM0 449 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 Q8N402 240 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 ZDHHC12Q96GR4 267 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 SORBS1Q9BX66 1292 aaKnown RBP15.25■□□□□ 0.03
PTPN11-201ENST00000351677 SLC17A9Q9BYT1 436 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 JUNDP17535 347 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 RAB28P51157 221 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 BMXP51813 675 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 INHBCP55103 352 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 SHC2P98077 582 aa15.25■□□□□ 0.03
PTPN11-201ENST00000351677 ZNF181Q2M3W8 571 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms