RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PLEKHH3Q7Z736 793 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 WDSUB1Q8N9V3 476 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 OR9Q2Q8NGE9 314 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 GTPBP3Q969Y2 492 aaKnown RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 MEGF10Q96KG7 1140 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 ATF6BQ99941 703 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 VRK1Q99986 396 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 C7orf50Q9BRJ6 194 aaKnown RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 ZNF334Q9HCZ1 680 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 TAS2R3Q9NYW6 316 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 EXTL2Q9UBQ6 330 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 LOC285095A0A1B0GVY8 99 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 CDC7O00311 574 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 IGF2P01344 180 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 DRD2P14416 443 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 ELK1P19419 428 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 SULT1E1P49888 294 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 KCTD2Q14681 263 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 ZNF613Q6PF04 617 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 ACOT1Q86TX2 421 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 DMBX1Q8NFW5 382 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 OR10G2Q8NGC3 310 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 AKR7LQ8NHP1 331 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 SNX33Q8WV41 574 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 RFT1Q96AA3 541 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 OTULINQ96BN8 352 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 FCRL1Q96LA6 429 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 MS4A4EQ96PG1 132 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 DPH2Q9BQC3 489 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 CPPED1Q9BRF8 314 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 DPAGT1Q9H3H5 408 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 SLC6A20Q9NP91 592 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 ENAMQ9NRM1 1142 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 WBP1LQ9NX94 342 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 SNX11Q9Y5W9 270 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 SPIN1Q9Y657 262 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 DENND4AQ7Z401 1863 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 PARP14Q460N5 1801 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 E9PI62 339 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ARPC5O15511 151 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 MSCO60682 206 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 SPDEFO95238 335 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 HPP00738 406 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 CXCL8P10145 99 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 NFYAP23511 347 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 AQP1P29972 269 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 RORAP35398 523 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 FEN1P39748 380 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 CDKN2CP42773 168 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 AFF1P51825 1210 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 BPIFB3P59826 476 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ATG9BQ674R7 924 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 KIAA0930Q6ICG6 404 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 EFCAB12Q6NXP0 572 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 DOK6Q6PKX4 331 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 LYPD4Q6UWN0 246 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 IL20RBQ6UXL0 311 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ZPBP2Q6X784 338 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 DEF8Q6ZN54 512 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 USP30Q70CQ3 517 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 NANOGP1Q8N7R0 232 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ZFP41Q8N8Y5 198 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 TRMT10AQ8TBZ6 339 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 PIH1D2Q8WWB5 315 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 SEBOXQ9HB31 216 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 EXOSC3Q9NQT5 275 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ZNF302Q9NR11 478 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 PPP1R14DQ9NXH3 145 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 CNOT2Q9NZN8 540 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 CPA4Q9UI42 421 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 PLEKHM1Q9Y4G2 1056 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 MAFBQ9Y5Q3 323 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 DOCK1Q14185 1865 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 LRIT2A6NDA9 550 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 MCRIP1C9JLW8 97 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ECI2O75521 394 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 RP2O75695 350 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ACPPP15309 386 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 TRHRP34981 398 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 EIF2S3P41091 472 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 CTSOP43234 321 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ERVPABLB-1P60509 514 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ACY1Q03154 408 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 PPIGQ13427 754 aaKnown RBP eCLIP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 HABP2Q14520 560 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 INSL4Q14641 139 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 PON3Q15166 354 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 PTGES3Q15185 160 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 EIF2S3LQ2VIR3 472 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 ZNF792Q3KQV3 632 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 Q6ZTK2 550 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 WDR53Q7Z5U6 358 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 C7orf31Q8N865 590 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 TSGA13Q96PP4 275 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 PCYT2Q99447 389 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 NXF3Q9H4D5 531 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 GAREM1Q9H706 876 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 AGO3Q9H9G7 860 aaKnown RBP10.12□□□□□ -0.79
CAPN3-203ENST00000349748 KCNK12Q9HB15 430 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 NRBP2Q9NSY0 501 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms