RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CCDC88CQ9P219 2028 aa25.33■■□□□ 1.64
SSBP4-202ENST00000348495 STMND1H3BQB6 276 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 PLOD2O00469 737 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 SLITRK5O94991 958 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 IFI6P09912 130 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 UQCRC2P22695 453 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 GALNSP34059 522 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 GPC1P35052 558 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 PUM1Q14671 1186 aaKnown RBP eCLIP25.32■■□□□ 1.64
SSBP4-202ENST00000348495 NSDHLQ15738 373 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 TMEM64Q6YI46 380 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 OR8J3Q8NGG0 315 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 ZFP90Q8TF47 636 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 CT55Q8WUE5 264 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 CTHRC1Q96CG8 243 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 RBM18Q96H35 190 aaKnown RBP25.32■■□□□ 1.64
SSBP4-202ENST00000348495 PELOQ9BRX2 385 aaKnown RBP25.32■■□□□ 1.64
SSBP4-202ENST00000348495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.32■■□□□ 1.64
SSBP4-202ENST00000348495 OR10H2O60403 315 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 C1QCP02747 245 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 RAB40ALP0C0E4 278 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 TMEM107Q6UX40 140 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 CLEC4FQ8N1N0 589 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 DGAT2Q96PD7 388 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 CPPED1Q9BRF8 314 aaPredicted RBP25.32■■□□□ 1.64
SSBP4-202ENST00000348495 TRIM8Q9BZR9 551 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 IKZF5Q9H5V7 419 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 EPS8L2Q9H6S3 715 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 CXorf21Q9HAI6 301 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 MAT2BQ9NZL9 334 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 NTMQ9P121 344 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 ABCD2Q9UBJ2 740 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 C3orf18Q9UK00 162 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 SNX8Q9Y5X2 465 aa25.32■■□□□ 1.64
SSBP4-202ENST00000348495 SYNDIG1LA6NDD5 238 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 RAD1O60671 282 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 HEXBP07686 556 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 CD63P08962 238 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 MC3RP41968 323 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 STAT5AP42229 794 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 EMP2P54851 167 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 RABL3Q5HYI8 236 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 SLC15A3Q8IY34 581 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 ENDOVQ8N8Q3 282 aaKnown RBP25.31■■□□□ 1.64
SSBP4-202ENST00000348495 OR7G2Q8NG99 324 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 KAT2AQ92830 837 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 TMEM125Q96AQ2 219 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 FAM120BQ96EK7 910 aaKnown RBP25.31■■□□□ 1.64
SSBP4-202ENST00000348495 SLC35A5Q9BS91 424 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 CADM1Q9BY67 442 aaKnown RBP25.31■■□□□ 1.64
SSBP4-202ENST00000348495 TPT1P8Q9HAU6 139 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 SPAG4Q9NPE6 437 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 WASF3Q9UPY6 502 aa25.31■■□□□ 1.64
SSBP4-202ENST00000348495 C15orf38-AP3S2A0A0A6YYH1 394 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 TERTO14746 1132 aaKnown RBP25.3■■□□□ 1.64
SSBP4-202ENST00000348495 GSC2O15499 205 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 ALOX12BO75342 701 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 TCN2P20062 427 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 NT5EP21589 574 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 MRPS35P82673 323 aaKnown RBP25.3■■□□□ 1.64
SSBP4-202ENST00000348495 MAP4K2Q12851 820 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 SELPLGQ14242 412 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 FHL5Q5TD97 284 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 GPR155Q7Z3F1 870 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 ARPINQ7Z6K5 226 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 KIF2BQ8N4N8 673 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 OR2Y1Q8NGV0 311 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 OR5AK3PQ8NH89 298 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 SFXN5Q8TD22 340 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 RIT1Q92963 219 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 CRB3Q9BUF7 120 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 CMTM6Q9NX76 183 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 TMEM181Q9P2C4 612 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 AHCTF1Q8WYP5 2266 aa25.3■■□□□ 1.64
SSBP4-202ENST00000348495 DCHS1Q96JQ0 3298 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 RNF103-CHMP3A0A140T963 221 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 CT62P0C5K7 136 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 SOAT1P35610 550 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 CCT3P49368 545 aaKnown RBP25.29■■□□□ 1.64
SSBP4-202ENST00000348495 SLC7A2P52569 658 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 FAM111BQ6SJ93 734 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 DTX1Q86Y01 620 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 GALNT12Q8IXK2 581 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 OR2L13Q8N349 312 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 PTPMT1Q8WUK0 201 aaPredicted RBP25.29■■□□□ 1.64
SSBP4-202ENST00000348495 ADAP2Q9NPF8 381 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 PTGFRNQ9P2B2 879 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 ZNF639Q9UID6 485 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 KLK13Q9UKR3 277 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 A0A087WV62 115 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 CLIC1O00299 241 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 PLOD3O60568 738 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 DNAJC8O75937 253 aaPredicted RBP25.29■■□□□ 1.64
SSBP4-202ENST00000348495 IFNA16P05015 189 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 UMODP07911 640 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 MTPNP58546 118 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 FOXC1Q12948 553 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 ELAVL1Q15717 326 aaKnown RBP25.29■■□□□ 1.64
SSBP4-202ENST00000348495 TRMT12Q53H54 448 aaKnown RBP25.29■■□□□ 1.64
SSBP4-202ENST00000348495 FAM69BQ5VUD6 431 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms