RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 UNC13CQ8NB66 2214 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 RP1P56715 2156 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 A0A1W2PQM1 296 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 FAM227AF5H4B4 570 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 H3BMH7 237 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 PLOD2O00469 737 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 SUV39H1O43463 412 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 GALR2O43603 387 aaPredicted RBP17.54■□□□□ 0.4
PTN-201ENST00000348225 LDB3O75112 727 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 ATP1B1P05026 303 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 FOLR1P15328 257 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 AQP1P29972 269 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 PTGER1P34995 402 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 COL9A2Q14055 689 aaPredicted RBP17.54■□□□□ 0.4
PTN-201ENST00000348225 YOD1Q5VVQ6 348 aaPredicted RBP17.54■□□□□ 0.4
PTN-201ENST00000348225 PATL1Q86TB9 770 aaKnown RBP17.54■□□□□ 0.4
PTN-201ENST00000348225 OR1L3Q8NH93 324 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 MIPOL1Q8TD10 442 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 NDC1Q9BTX1 674 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 SMOC1Q9H4F8 434 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 PTGFRNQ9P2B2 879 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 PDP2Q9P2J9 529 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 TRPC4Q9UBN4 977 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 CDC14AQ9UNH5 594 aa17.54■□□□□ 0.4
PTN-201ENST00000348225 ASXL3Q9C0F0 2248 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 ADAMTS20P59510 1910 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 FAM149AA5PLN7 773 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 HMGN4O00479 90 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 CLDN4O14493 209 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 CLOCKO15516 846 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 MT-ND1P03886 318 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 HMGN2P05204 90 aaKnown RBP17.53■□□□□ 0.4
PTN-201ENST00000348225 IFI6P09912 130 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 ACADSP16219 412 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 NUBP1P53384 320 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 ARSFP54793 590 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 ID2Q02363 134 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 ACY1Q03154 408 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 LASP1Q14847 261 aaKnown RBP17.53■□□□□ 0.4
PTN-201ENST00000348225 NKG7Q16617 165 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTN-201ENST00000348225 CYBRD1Q53TN4 286 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 CMPK2Q5EBM0 449 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 GALNT10Q86SR1 603 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 KAT2AQ92830 837 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 PEX11GQ96HA9 241 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 MS4A4EQ96PG1 132 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 SERHL2Q9H4I8 314 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 NTMQ9P121 344 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 PCDHGB2Q9Y5G2 931 aa17.53■□□□□ 0.4
PTN-201ENST00000348225 ASNA1O43681 348 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 PDE9AO76083 593 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 BCHEP06276 602 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 NT5EP21589 574 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 GRK6P43250 576 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 MAPK10P53779 464 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 PCBP3P57721 371 aaKnown RBP17.52■□□□□ 0.4
PTN-201ENST00000348225 GNA13Q14344 377 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 MYBPC3Q14896 1274 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 SFT2D3Q587I9 215 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 ZNF628Q5EBL2 1059 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 CRB2Q5IJ48 1285 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 ZNF574Q6ZN55 896 aaPredicted RBP17.52■□□□□ 0.4
PTN-201ENST00000348225 TTLL10Q6ZVT0 673 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 SLC38A5Q8WUX1 472 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 LZICQ8WZA0 190 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 RAB8BQ92930 207 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 ANKRD9Q96BM1 317 aaPredicted RBP17.52■□□□□ 0.4
PTN-201ENST00000348225 ZNF501Q96CX3 271 aaPredicted RBP17.52■□□□□ 0.4
PTN-201ENST00000348225 TMEM19Q96HH6 336 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 HSH2DQ96JZ2 352 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 C9orf16Q9BUW7 83 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 C8orf4Q9NR00 106 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 FGF21Q9NSA1 209 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 DNAJB9Q9UBS3 223 aa17.52■□□□□ 0.4
PTN-201ENST00000348225 CASC3O15234 703 aaKnown RBP17.51■□□□□ 0.39
PTN-201ENST00000348225 CTNSO60931 367 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 TFPTP0C1Z6 253 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 SLC35E2P0CK97 266 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 OR12D1P0DN82 309 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 ATP6V1C1P21283 382 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 CLCN2P51788 898 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 AQP4P55087 323 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 MAT1AQ00266 395 aaKnown RBP17.51■□□□□ 0.39
PTN-201ENST00000348225 SLC13A2Q13183 592 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 TMPRSS9Q7Z410 1059 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 ARHGAP22Q7Z5H3 698 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 LGI4Q8N135 537 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 OR2L13Q8N349 312 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 METTL27Q8N6F8 245 aaPredicted RBP17.51■□□□□ 0.39
PTN-201ENST00000348225 OR7G2Q8NG99 324 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 OR51Q1Q8NH59 317 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 ZNF675Q8TD23 568 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 TPD52L3Q96J77 140 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 VPS50Q96JG6 964 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 CIB1Q99828 191 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 DOHHQ9BU89 302 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 RBCK1Q9BYM8 510 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 PRTFDC1Q9NRG1 225 aa17.51■□□□□ 0.39
PTN-201ENST00000348225 NDOR1Q9UHB4 597 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms