RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 MRPS35P82673 323 aaKnown RBP17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 ART3Q13508 389 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 DNASE1L3Q13609 305 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 SELPLGQ14242 412 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 PRICKLE4Q2TBC4 344 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 LACTB2Q53H82 288 aaPredicted RBP17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 TMEM107Q6UX40 140 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 ZNF621Q6ZSS3 439 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 ANKRD37Q7Z713 158 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 SAMD14Q8IZD0 417 aaPredicted RBP17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 ST13P4Q8IZP2 240 aaPredicted RBP17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 PCYOX1LQ8NBM8 494 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 OR5AK3PQ8NH89 298 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 ZFP28Q8NHY6 868 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 PSMA8Q8TAA3 256 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 DGAT2Q96PD7 388 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 PHF12Q96QT6 1004 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 GPATCH1Q9BRR8 931 aaKnown RBP17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 PNO1Q9NRX1 252 aaKnown RBP17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 MAT2BQ9NZL9 334 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 NXT1Q9UKK6 140 aaKnown RBP17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 FARSAQ9Y285 508 aaKnown RBP17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 AHCTF1Q8WYP5 2266 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 PCSK5Q92824 1860 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 IGHV3-20A0A0C4DH32 117 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 OR10H2O60403 315 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 NME6O75414 186 aaPredicted RBP17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 ERN1O75460 977 aaKnown RBP17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 IFNA16P05015 189 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 GPC1P35052 558 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 DLSTP36957 453 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 MC3RP41968 323 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 SERTAD2Q14140 314 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 TRMT12Q53H54 448 aaKnown RBP17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 FHL5Q5TD97 284 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 TMEM205Q6UW68 189 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 HACD2Q6Y1H2 254 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 OR7G2Q8NG99 324 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 OR2Y1Q8NGV0 311 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 ELP4Q96EB1 424 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 MAGED4Q96JG8 741 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 CGREF1Q99674 301 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 IKZF5Q9H5V7 419 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 EPS8L2Q9H6S3 715 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 CXorf21Q9HAI6 301 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 PCDHGB4Q9UN71 923 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 SNX8Q9Y5X2 465 aa17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 MRPS18BQ9Y676 258 aaKnown RBP17.76■□□□□ 0.43
CHMP4A-201ENST00000347519 AKAP13Q12802 2813 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 ZCCHC18P0CG32 403 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 S1PR1P21453 382 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 SOAT1P35610 550 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 PSME3P61289 254 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 MXRA7P84157 204 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 LRRC74AQ0VAA2 488 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 DUSP8Q13202 625 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 RUNDC3AQ59EK9 446 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 ZFP90Q8TF47 636 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 PTPMT1Q8WUK0 201 aaPredicted RBP17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 ROPN1LQ96C74 230 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 C8orf44Q96CB5 159 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 NXPE2Q96DL1 559 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 FAM120BQ96EK7 910 aaKnown RBP17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 CPPED1Q9BRF8 314 aaPredicted RBP17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 THSD1Q9NS62 852 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 GID8Q9NWU2 228 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 GMPR2Q9P2T1 348 aaKnown RBP17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 IL17BQ9UHF5 180 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 TCFL5Q9UL49 500 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 VPS4AQ9UN37 437 aa17.75■□□□□ 0.43
CHMP4A-201ENST00000347519 TPRP12270 2363 aaKnown RBP17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 ANP32DO95626 131 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 FOLR3P41439 243 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 MNAT1P51948 309 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 OR4D2P58180 307 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 MAP4K2Q12851 820 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 SRSF6Q13247 344 aaKnown RBP17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 EXOSC7Q15024 291 aaKnown RBP17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 C10orf111Q8N326 155 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 ZNF321PQ8N8H1 164 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 ZNF675Q8TD23 568 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 RIT1Q92963 219 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 CTHRC1Q96CG8 243 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 RBM18Q96H35 190 aaKnown RBP17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 ANKRD27Q96NW4 1050 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 WDR77Q9BQA1 342 aaPredicted RBP17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 SLC35A5Q9BS91 424 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 ZNF639Q9UID6 485 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 PACSIN3Q9UKS6 424 aa17.74■□□□□ 0.43
CHMP4A-201ENST00000347519 RNF103-CHMP3A0A140T963 221 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 C17orf105B2RV13 164 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 UPK1AO00322 258 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 PLOD2O00469 737 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 ATP5HO75947 161 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 CBX7O95931 251 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 CLPSP04118 112 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 KRT16P08779 473 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 TNNI3P19429 210 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 UQCRC2P22695 453 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms