RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 MAGEA2P43356 314 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 HSPA13P48723 471 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 CRYBA2P53672 197 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 PPP4R4Q6NUP7 873 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 ZDHHC21Q8IVQ6 265 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 GALNT4Q8N4A0 578 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 PACRGLQ8N7B6 248 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 OR10Q1Q8NGQ4 319 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 SLC38A5Q8WUX1 472 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 KAT2AQ92830 837 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 RAB8BQ92930 207 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 VPS50Q96JG6 964 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 DPYSL5Q9BPU6 564 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 DOHHQ9BU89 302 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 GTPBP2Q9BX10 602 aaKnown RBP20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 HCN3Q9P1Z3 774 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 PTGFRNQ9P2B2 879 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 P2RX2Q9UBL9 471 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 ZDBF2Q9HCK1 2354 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 H3BMH7 237 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 SLITRK5O94991 958 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 CPNE6O95741 557 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 ATP1B1P05026 303 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 HMGN2P05204 90 aaKnown RBP20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 BCHEP06276 602 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 OR12D1P0DN82 309 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 SELENOWP63302 87 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 CCL7P80098 99 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 LASP1Q14847 261 aaKnown RBP20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 LZICQ8WZA0 190 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 ANKRD9Q96BM1 317 aaPredicted RBP20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 MMABQ96EY8 250 aaPredicted RBP20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 TPD52L3Q96J77 140 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 IL1RAPQ9NPH3 570 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 CUTCQ9NTM9 273 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 DDX18Q9NVP1 670 aaKnown RBP20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 OAZ3Q9UMX2 235 aa20.16■□□□□ 0.82
TSPAN3-202ENST00000346495 ADAMTS20P59510 1910 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 DNAH14Q0VDD8 3507 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 M0QX08 132 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 PDE9AO76083 593 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 BMP10O95393 424 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 RPLP0P05388 317 aaKnown RBP20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 IFI6P09912 130 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 FOLR1P15328 257 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 MPLP40238 635 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 DUSP3P51452 185 aaPredicted RBP20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 CLCN2P51788 898 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 ID2Q02363 134 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 TLDC1Q6P9B6 456 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 VTCN1Q7Z7D3 282 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 EPHX4Q8IUS5 362 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 ZNF595Q8IYB9 648 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 GPR135Q8IZ08 494 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 MVB12AQ96EY5 273 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 PEX11GQ96HA9 241 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 TMEM19Q96HH6 336 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 LRRN3Q9H3W5 708 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 FANCEQ9HB96 536 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 SERTAD3Q9UJW9 196 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 ATXN7L1Q9ULK2 861 aaPredicted RBP20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 SCN2AQ99250 2005 aa20.15■□□□□ 0.82
TSPAN3-202ENST00000346495 UPK1AO00322 258 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 GNGT2O14610 69 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 FABP3P05413 133 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 ANKRD34CP0C6C1 535 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 CKMT1AP12532 417 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 UQCRBP14927 111 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 ITGA1P56199 1179 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 RP1P56715 2156 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 DAB2P98082 770 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 GNA13Q14344 377 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 PROX2Q3B8N5 592 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 ZNF628Q5EBL2 1059 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 SHISA5Q8N114 240 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 LGI4Q8N135 537 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 OR2L13Q8N349 312 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 OR7G2Q8NG99 324 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 OR4D9Q8NGE8 314 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 OR5D16Q8NGK9 328 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 OR1L3Q8NH93 324 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 XAGE5Q8WWM1 108 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 TAMM41Q96BW9 452 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 MS4A4EQ96PG1 132 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 SLC29A1Q99808 456 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 NTN4Q9HB63 628 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 BAG5Q9UL15 447 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 PCDHGA5Q9Y5G8 931 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 UNC13CQ8NB66 2214 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 KMT2EQ8IZD2 1858 aa20.14■□□□□ 0.81
TSPAN3-202ENST00000346495 A0A1W2PQM1 296 aa20.13■□□□□ 0.81
TSPAN3-202ENST00000346495 SOCS2O14508 198 aa20.13■□□□□ 0.81
TSPAN3-202ENST00000346495 ASNA1O43681 348 aa20.13■□□□□ 0.81
TSPAN3-202ENST00000346495 SLC28A2O43868 658 aa20.13■□□□□ 0.81
TSPAN3-202ENST00000346495 PGM3O95394 542 aa20.13■□□□□ 0.81
TSPAN3-202ENST00000346495 ZNF23P17027 643 aa20.13■□□□□ 0.81
TSPAN3-202ENST00000346495 NT5EP21589 574 aa20.13■□□□□ 0.81
TSPAN3-202ENST00000346495 NRF1Q16656 503 aa20.13■□□□□ 0.81
TSPAN3-202ENST00000346495 YOD1Q5VVQ6 348 aaPredicted RBP20.13■□□□□ 0.81
TSPAN3-202ENST00000346495 ZNF574Q6ZN55 896 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms