RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PPIGQ13427 754 aaKnown RBP eCLIP18.57■□□□□ 0.565e-8■■□□□ 12.9
HDAC4-201ENST00000345617 C2orf73Q8N5S3 287 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-201ENST00000345617 ARNTL2Q8WYA1 636 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 ACSL6Q9UKU0 697 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 AGAP14A8MT82 685 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 MFSD13AQ14CX5 517 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 BLOC1S3Q6QNY0 202 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 OR7G1Q8NGA0 311 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 OR4K17Q8NGC6 315 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 OR2S2Q9NQN1 319 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 ZNF225Q9UK10 706 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 METTL4Q8N3J2 472 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 CDKN2AIPNLQ96HQ2 116 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 SAMD10Q9BYL1 202 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 EVA1AQ9H8M9 152 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 TDP1Q9NUW8 608 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 CD300AQ9UGN4 299 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 CACNG2Q9Y698 323 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 SLC2A5P22732 501 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 MINDY3Q9H8M7 445 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 LIN28AQ9H9Z2 209 aaKnown RBP18.57■□□□□ 0.56
HDAC4-201ENST00000345617 EBF1Q9UH73 591 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 CD84Q9UIB8 345 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 SALL4Q9UJQ4 1053 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 SLC25A11Q02978 314 aaKnown RBP18.57■□□□□ 0.56
HDAC4-201ENST00000345617 ADGRF1Q5T601 910 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 ZNF559Q9BR84 538 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 EDDM13A0A1B0GTR0 161 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 CRTAPO75718 401 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-201ENST00000345617 UGT2B7P16662 529 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 DACT2Q5SW24 774 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 TAC4Q86UU9 113 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 ZDHHC1Q8WTX9 485 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 RNF225M0QZC1 329 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-201ENST00000345617 OPN1SWP03999 348 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 CLCNKBP51801 687 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 ZNF678Q5SXM1 525 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 MPP7Q5T2T1 576 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 GLYATL1Q969I3 302 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 IGFLR1Q9H665 355 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 LAMB1P07942 1786 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 SNHG28P0DPA3 235 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 VGLL4Q14135 290 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 GINS1Q14691 196 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 OR51J1Q9H342 316 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 CDHR4A6H8M9 788 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 BMXP51813 675 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 UBE2NLQ5JXB2 153 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 KCT2Q8NC54 265 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 GLYATL2Q8WU03 294 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 MRPS17Q9Y2R5 130 aaKnown RBP18.56■□□□□ 0.56
HDAC4-201ENST00000345617 ENPP3O14638 875 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 CD9P21926 228 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 ZNF33BQ06732 778 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 LRRC32Q14392 662 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 SPANXN4Q5MJ08 99 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 ARMC5Q96C12 935 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 BMFQ96LC9 184 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 OARD1Q9Y530 152 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 MYLK3Q32MK0 819 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 ZNF783Q6ZMS7 281 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 PTERQ96BW5 349 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 ERVK-18Q9QC07 812 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 RPL35P42766 123 aaKnown RBP18.56■□□□□ 0.56
HDAC4-201ENST00000345617 MAP2K4P45985 399 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 PTH2RP49190 550 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 FUT2Q10981 343 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 SERINC3Q13530 473 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 LNX2Q8N448 690 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 TXNDC5Q8NBS9 432 aaKnown RBP18.56■□□□□ 0.56
HDAC4-201ENST00000345617 STRA6Q9BX79 667 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 SLC19A3Q9BZV2 496 aa18.56■□□□□ 0.56
HDAC4-201ENST00000345617 FTCDNL1E5RQL4 147 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 EDNRBP24530 442 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 GAD2Q05329 585 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 NDUFAF5Q5TEU4 345 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 FAM109AQ8N4B1 249 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 CLEC4EQ9ULY5 219 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 CASC3O15234 703 aaKnown RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 MLC1Q15049 377 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 RSU1Q15404 277 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 DCP2Q8IU60 420 aaKnown RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 TCEAL2Q9H3H9 227 aaPredicted RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 KCNIP1Q9NZI2 227 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 TMEM233B4DJY2 109 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 J3KR12 359 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 TGFB1P01137 390 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 STT3AP46977 705 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 MAP2K5Q13163 448 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 TPGS2Q68CL5 300 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 TMEM173Q86WV6 379 aaPredicted RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 BEX2Q9BXY8 128 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 BEX1Q9HBH7 125 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 PLEKHM1Q9Y4G2 1056 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 HOXA10P31260 410 aaPredicted RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 TRIM46Q7Z4K8 759 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 LRRC28Q86X40 367 aaPredicted RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 ZFAND4Q86XD8 727 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 C12orf45Q8N5I9 185 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms