RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 HRH3Q9Y5N1 445 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 PHF3Q92576 2039 aaKnown RBP13.32□□□□□ -0.28
HMGN3-202ENST00000344726 TFECO14948 347 aaPredicted RBP13.32□□□□□ -0.28
HMGN3-202ENST00000344726 DYRK3O43781 588 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 ULK1O75385 1050 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 ESRRBO95718 433 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 MLYCDO95822 493 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 KRT6AP02538 564 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 KRT6BP04259 564 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 CCL3P10147 92 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 MYL2P10916 166 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 HSD3B1P14060 373 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 CPMP14384 443 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 HSD3B2P26439 372 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 HMOX2P30519 316 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 SOX18P35713 384 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 KRT6CP48668 564 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 PKNOX1P55347 436 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 HMGCS1Q01581 520 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 SLC18A2Q05940 514 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 CSTF3Q12996 717 aaKnown RBP13.32□□□□□ -0.28
HMGN3-202ENST00000344726 ZNF791Q3KP31 576 aaPredicted RBP13.32□□□□□ -0.28
HMGN3-202ENST00000344726 SP5Q6BEB4 398 aaPredicted RBP13.32□□□□□ -0.28
HMGN3-202ENST00000344726 FAM180BQ6P0A1 224 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 SLC48A1Q6P1K1 146 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 OPN5Q6U736 354 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 SCIMPQ6UWF3 145 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 RNF111Q6ZNA4 994 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 RTL4Q6ZR62 310 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 DOLPP1Q86YN1 238 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 LURAP1LQ8IV03 231 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 CNPY4Q8N129 248 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 C4orf33Q8N1A6 199 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 GHDCQ8N2G8 530 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 ZNF808Q8N4W9 903 aaPredicted RBP13.32□□□□□ -0.28
HMGN3-202ENST00000344726 CCNYL1Q8N7R7 359 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 OR2M7Q8NG81 312 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 APIPQ96GX9 242 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 GAL3ST4Q96RP7 486 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 PPCSQ9HAB8 311 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 SH2D2AQ9NP31 389 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 TNFRSF12AQ9NP84 129 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 HEY2Q9UBP5 337 aa13.32□□□□□ -0.28
HMGN3-202ENST00000344726 SUCOQ9UBS9 1254 aaKnown RBP13.32□□□□□ -0.28
HMGN3-202ENST00000344726 CSMD2Q7Z408 3487 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 A0A1B0GTH9 108 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 C1orf226A1L170 272 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 CDH16O75309 829 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 ENO1P06733 434 aaKnown RBP13.31□□□□□ -0.28
HMGN3-202ENST00000344726 KRT4P19013 534 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 S1PR1P21453 382 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 NAGLUP54802 743 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 MGAT2Q10469 447 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 FUT7Q11130 342 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 ART3Q13508 389 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 CCDC153Q494R4 210 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 FRMD7Q6ZUT3 714 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 SLC29A4Q7RTT9 530 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 GALNT12Q8IXK2 581 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 ZNF615Q8N8J6 731 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 ZNF441Q8N8Z8 693 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 GOLM1Q8NBJ4 401 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 AENQ8WTP8 325 aaKnown RBP13.31□□□□□ -0.28
HMGN3-202ENST00000344726 C11orf24Q96F05 449 aaPredicted RBP13.31□□□□□ -0.28
HMGN3-202ENST00000344726 DMRTA2Q96SC8 542 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 MID1IP1Q9NPA3 183 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 NMRK1Q9NWW6 199 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.31□□□□□ -0.28
HMGN3-202ENST00000344726 MCM8Q9UJA3 840 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 GRID1Q9ULK0 1009 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 STK38LQ9Y2H1 464 aa13.31□□□□□ -0.28
HMGN3-202ENST00000344726 V9GYY5 206 aaPredicted RBP13.31□□□□□ -0.28
HMGN3-202ENST00000344726 ABCA12Q86UK0 2595 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 TLDC2A0PJX2 215 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 OR6C76A6NM76 312 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 FAM166BA8MTA8 275 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 C19orf84I3L1E1 186 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 COPEO14579 308 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 CDC40O60508 579 aaKnown RBP eCLIP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 ERAL1O75616 437 aaKnown RBP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 GLSO94925 669 aaPredicted RBP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 NUDT17P0C025 328 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 PORP16435 677 aaPredicted RBP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 ABOP16442 354 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 CNR1P21554 472 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 NT5EP21589 574 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 FEN1P39748 380 aaKnown RBP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 CCT5P48643 541 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 DNASE1L1P49184 302 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 DNAJB13P59910 316 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 TRA2BP62995 288 aaKnown RBP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 FOXO1Q12778 655 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 DUSP8Q13202 625 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 PRICKLE4Q2TBC4 344 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 FAM111BQ6SJ93 734 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 RPTNQ6XPR3 784 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 TMEM64Q6YI46 380 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 BNC2Q6ZN30 1099 aaPredicted RBP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 TICAM1Q8IUC6 712 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms