RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SBF2Q86WG5 1849 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 CDC14CA4D256 554 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 AP1G1O43747 822 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 LYNP07948 512 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 CCR5P51681 352 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 SELENOVP59797 346 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 TRA2BP62995 288 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 SH3BP2P78314 561 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 PON3Q15166 354 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 OR52P1PQ8NH57 321 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 IFI44Q8TCB0 444 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 PTERQ96BW5 349 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 MGAT4BQ9UQ53 548 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 SHANK3Q9BYB0 1731 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 TMEM202A6NGA9 273 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 EEDO75530 441 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 SLC6A9P48067 706 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 SRYQ05066 204 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 RABL3Q5HYI8 236 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 FAM180AQ6UWF9 173 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 PACRGLQ8N7B6 248 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 LMNTD1Q8N9Z9 388 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 OSTF1Q92882 214 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 DNAJA3Q96EY1 480 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 CRELD1Q96HD1 420 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 MPP4Q96JB8 637 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 POU2F3Q9UKI9 436 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 DNAJC15Q9Y5T4 150 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 CIB4A0PJX0 185 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 GJE1A6NN92 205 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 METTL12A8MUP2 240 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 IGLV3-27P01718 113 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 LSM3P62310 102 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 C5orf22Q49AR2 442 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 OR4C15Q8NGM1 316 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 SLC37A2Q8TED4 501 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 KHSRPQ92945 711 aaKnown RBP eCLIP15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 OR1F2PQ96R84 312 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 ACTRT3Q9BYD9 372 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 CENPMQ9NSP4 180 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 KCND3Q9UK17 655 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 KHDRBS3O75525 346 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 ZNF20P17024 532 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 CERS1P27544 350 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 AHRP35869 848 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 PLP2Q04941 152 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 HLA-BQ31612 363 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 GFOD2Q3B7J2 385 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 NANOGP8Q6NSW7 305 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 CANT1Q8WVQ1 401 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 NANOGQ9H9S0 305 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 SEC16AO15027 2179 aa15.59■□□□□ 0.09
SMARCA4-201ENST00000344626 VSTM2BA6NLU5 285 aa15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 GPAT4Q86UL3 456 aa15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 CCDC74AQ96AQ1 378 aa15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 PAIP1Q9H074 479 aaKnown RBP15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 SOX17Q9H6I2 414 aaPredicted RBP15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 TMEM45AQ9NWC5 275 aa15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 KLHL18O94889 574 aa15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 PRDX1Q06830 199 aaKnown RBP15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 GPR18Q14330 331 aa15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 LRIF1Q5T3J3 769 aa15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 ADAD1Q96M93 576 aaKnown RBP15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 NTMT1Q9BV86 223 aa15.58■□□□□ 0.09
SMARCA4-201ENST00000344626 C2orf92A0A1B0GVN3 265 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 SH3PXD2BA1X283 911 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 PDCD5O14737 125 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 FGF4P08620 206 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 XRCC1P18887 633 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 GDI2P50395 445 aaKnown RBP15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 CLRN1P58418 232 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 TCTN1Q2MV58 587 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 VMACQ2NL98 169 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 CTSL3PQ5NE16 218 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 B3GNT6Q6ZMB0 384 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 FAM86B1Q8N7N1 296 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 ZNF480Q8WV37 535 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 PLEKHM1Q9Y4G2 1056 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 ZNF670-ZNF695F2Z2N8 137 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 PSMB5P28074 263 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 CCL11P51671 97 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 MRPL49Q13405 166 aaKnown RBP15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 C6orf52Q5T4I8 152 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 KLHL36Q8N4N3 616 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 DHCR7Q9UBM7 475 aaKnown RBP15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 SLC7A8Q9UHI5 535 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 TRIP12Q14669 1992 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 DNAJC13O75165 2243 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 PROM1O43490 865 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 HK1P19367 917 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 SDHBP21912 280 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 ZNF84P51523 738 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 BTN2A1Q7KYR7 527 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 AQP11Q8NBQ7 271 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 UFD1Q92890 307 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 NODALQ96S42 347 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 COQ10BQ9H8M1 238 aa15.58■□□□□ 0.08
SMARCA4-201ENST00000344626 C17orf105B2RV13 164 aa15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 RNF144AP50876 292 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-201ENST00000344626 ADARP55265 1226 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms