RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ZC3H7AQ8IWR0 971 aaKnown RBP16.3■□□□□ 0.2
CLDN4-201ENST00000340958 TMEM52Q8NDY8 209 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 OR56A1Q8NGH5 318 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 OR51Q1Q8NH59 317 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 PSMA8Q8TAA3 256 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 FBXO30Q8TB52 745 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 KAT2AQ92830 837 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 SLC35G5Q96KT7 338 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 SEPHS2Q99611 448 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 PDP2Q9P2J9 529 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 TRPC4Q9UBN4 977 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 RARRES3Q9UL19 164 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 BLACEA4D250 179 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 TMEM247A6NEH6 219 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 D6RAR5 112 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 H3BNX3 289 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 EMC8O43402 210 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 SERPINA1P01009 418 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 GPIP06744 558 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 GP1BAP07359 652 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 FHP07954 510 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 UMPSP11172 480 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 OR1D4P47884 311 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 ANXA11P50995 505 aaKnown RBP16.29■□□□□ 0.2
CLDN4-201ENST00000340958 ERV3-1Q14264 604 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 LTB4RQ15722 352 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 CEBPEQ15744 281 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 MFSD4BQ5TF39 518 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 YOD1Q5VVQ6 348 aaPredicted RBP16.29■□□□□ 0.2
CLDN4-201ENST00000340958 TMEM64Q6YI46 380 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 DBX2Q6ZNG2 339 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 SHISA5Q8N114 240 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 GOLM1Q8NBJ4 401 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 TBC1D20Q96BZ9 403 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 MVB12AQ96EY5 273 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 PRTFDC1Q9NRG1 225 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 DDX18Q9NVP1 670 aaKnown RBP16.29■□□□□ 0.2
CLDN4-201ENST00000340958 C5orf58C9J3I9 102 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 BMP10O95393 424 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 MATN1P21941 496 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 ACP1P24666 158 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 XCR1P46094 333 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 C1orf189Q5VU69 101 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 GPR155Q7Z3F1 870 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 PTOV1Q86YD1 416 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 TMEM126BQ8IUX1 230 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 NAXDQ8IW45 347 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 ZNF595Q8IYB9 648 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 NUP43Q8NFH3 380 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 SFXN5Q8TD22 340 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 ELP4Q96EB1 424 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 UGT2B28Q9BY64 529 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 ZNF304Q9HCX3 659 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 GPATCH2Q9NW75 528 aa16.29■□□□□ 0.2
CLDN4-201ENST00000340958 C6orf203Q9P0P8 240 aaPredicted RBP16.29■□□□□ 0.2
CLDN4-201ENST00000340958 A0A1B0GX78 115 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 DSCR3O14972 297 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 ZNF682O95780 498 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 FBLP22087 321 aaKnown RBP16.28■□□□□ 0.2
CLDN4-201ENST00000340958 AQP1P29972 269 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 PTDSS1P48651 473 aaKnown RBP16.28■□□□□ 0.2
CLDN4-201ENST00000340958 MVDP53602 400 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 MRPS35P82673 323 aaKnown RBP16.28■□□□□ 0.2
CLDN4-201ENST00000340958 RBBP4Q09028 425 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 SCARB2Q14108 478 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 C16orf72Q14CZ0 275 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 ADRM1Q16186 407 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 FAM98BQ52LJ0 330 aaKnown RBP16.28■□□□□ 0.2
CLDN4-201ENST00000340958 LRRC74BQ6ZQY2 392 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 PIP4P1Q86T03 277 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 SLC44A2Q8IWA5 706 aaPredicted RBP16.28■□□□□ 0.2
CLDN4-201ENST00000340958 PQLC1Q8N2U9 271 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 DEFB124Q8NES8 71 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 NFKBIDQ8NI38 313 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 RNF145Q96MT1 663 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 EPS8L2Q9H6S3 715 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 EQTNQ9NQ60 294 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 CCM2LQ9NUG4 571 aaPredicted RBP16.28■□□□□ 0.2
CLDN4-201ENST00000340958 SRPK3Q9UPE1 567 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 ANGPT4Q9Y264 503 aa16.28■□□□□ 0.2
CLDN4-201ENST00000340958 TCRBV5S2A0A599 114 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 H3BMH7 237 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 TPST1O60507 370 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 TNFRSF21O75509 655 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 PCGF2P35227 344 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 KHKP50053 298 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 CDK6Q00534 326 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 CHRNB3Q05901 458 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 VEZF1Q14119 521 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 ZNF630Q2M218 657 aaPredicted RBP16.27■□□□□ 0.2
CLDN4-201ENST00000340958 INTS11Q5TA45 600 aaKnown RBP16.27■□□□□ 0.2
CLDN4-201ENST00000340958 ARHGAP40Q5TG30 622 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 HORMAD2Q8N7B1 307 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 POP5Q969H6 163 aaKnown RBP16.27■□□□□ 0.2
CLDN4-201ENST00000340958 CLIP3Q96DZ5 547 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 RNF31Q96EP0 1072 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 RBM18Q96H35 190 aaKnown RBP16.27■□□□□ 0.2
CLDN4-201ENST00000340958 YIPF4Q9BSR8 244 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 CHST8Q9H2A9 424 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms