RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 CLIC1O00299 241 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 RECKO95980 971 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 MC3RP41968 323 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 MRPS35P82673 323 aaKnown RBP12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 NKG7Q16617 165 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 MRPL14Q6P1L8 145 aaKnown RBP12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 FAM198BQ6UWH4 519 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 TMPRSS7Q7RTY8 843 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 TIPARPQ7Z3E1 657 aaKnown RBP12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 ULK2Q8IYT8 1036 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 C10orf111Q8N326 155 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 TRIML2Q8N7C3 387 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 PNPT1Q8TCS8 783 aaKnown RBP12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 SLC26A1Q9H2B4 701 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 SOX17Q9H6I2 414 aaPredicted RBP12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 ANKRA2Q9H9E1 313 aa12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 PRPF19Q9UMS4 504 aaKnown RBP12.5□□□□□ -0.41
GTF2F2-201ENST00000340473 C15orf38-AP3S2A0A0A6YYH1 394 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 NQO1P15559 274 aaKnown RBP12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 UQCRC2P22695 453 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 ZNF628Q5EBL2 1059 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 PIGGQ5H8A4 983 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 TMEM164Q5U3C3 297 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 PGM2L1Q6PCE3 622 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 GPR155Q7Z3F1 870 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 ARPINQ7Z6K5 226 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 ST13P4Q8IZP2 240 aaPredicted RBP12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 GALNT15Q8N3T1 639 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 FAM156AQ8NDB6 213 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 OR7G2Q8NG99 324 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 ELP4Q96EB1 424 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 FAM120BQ96EK7 910 aaKnown RBP12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 MAGED4Q96JG8 741 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 SPSB2Q99619 263 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 THUMPD3Q9BV44 507 aaKnown RBP12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 EPS8L2Q9H6S3 715 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 C14orf105Q9NVL8 296 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 L3MBTL1Q9Y468 752 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 PCDHGA8Q9Y5G5 932 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 SDK2Q58EX2 2172 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 CCDC88CQ9P219 2028 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 RNF103-CHMP3A0A140T963 221 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 PRORSD1PA6NEY8 169 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 MGRN1O60291 552 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 OR10H2O60403 315 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 ALBP02768 609 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 CT62P0C5K7 136 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 NT5EP21589 574 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 CCT3P49368 545 aaKnown RBP12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 CASP9P55211 416 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 GABREP78334 506 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 MGAT2Q10469 447 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 SPDYE7PQ495Y7 208 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 FAM111BQ6SJ93 734 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 C6orf15Q6UXA7 325 aaPredicted RBP12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 HPS6Q86YV9 775 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 FBXW8Q8N3Y1 598 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 SIMC1Q8NDZ2 872 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 TACO1Q9BSH4 297 aaKnown RBP12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 KAT8Q9H7Z6 458 aaKnown RBP12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 POLR1BQ9H9Y6 1135 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 SEMA3GQ9NS98 782 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 GPATCH2Q9NW75 528 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 CD300AQ9UGN4 299 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 USP22Q9UPT9 525 aa12.49□□□□□ -0.41
GTF2F2-201ENST00000340473 CHI3L1P36222 383 aaPredicted RBP12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 STT3AP46977 705 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 MVDP53602 400 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 ELF3P78545 371 aaPredicted RBP12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 SERTAD2Q14140 314 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 NSDHLQ15738 373 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 PRICKLE4Q2TBC4 344 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 TRMT12Q53H54 448 aaKnown RBP12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 FAM69BQ5VUD6 431 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 ANGPTL8Q6UXH0 198 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 TMEM64Q6YI46 380 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 OR10A6Q8NH74 314 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 RBM18Q96H35 190 aaKnown RBP12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 DGAT2Q96PD7 388 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 MMADHCQ9H3L0 296 aaPredicted RBP12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 PIF1Q9H611 641 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 ZCCHC3Q9NUD5 404 aaKnown RBP12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 MAT2BQ9NZL9 334 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 GMEB1Q9Y692 573 aa12.48□□□□□ -0.41
GTF2F2-201ENST00000340473 TCRBV16S1A1N1A0A5B0 115 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 IDSB3KWA1 339 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 UPK1AO00322 258 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 IFNA16P05015 189 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 GPX2P18283 190 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 TCN1P20061 433 aaPredicted RBP12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 MSX2P35548 267 aaPredicted RBP12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 LIPEQ05469 1076 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 TP53BP2Q13625 1128 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 NCF4Q15080 339 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 SAMD4BQ5PRF9 694 aaKnown RBP12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 COX20Q5RI15 118 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 FHL5Q5TD97 284 aa12.47□□□□□ -0.41
GTF2F2-201ENST00000340473 SAXO2Q658L1 398 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms