RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 KCNE2Q9Y6J6 123 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 F5P12259 2224 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 ETHE1O95571 254 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 PSMA1P25786 263 aaKnown RBP17.81■□□□□ 0.44
PSPC1-201ENST00000338910 TMEM52BQ4KMG9 183 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 SAXO2Q658L1 398 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 GRHL2Q6ISB3 625 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 OR4M1Q8NGD0 313 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 NIPAL2Q9H841 368 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 ABCB9Q9NP78 766 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 C1orf226A1L170 272 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 SERTM1A2A2V5 107 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 PRAMEF25A6NGN4 478 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 C1QTNF3-AMACRE9PGA6 284 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 H0YIV9 168 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 PLA2G10O15496 165 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 CCNYL3P0C7X3 344 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 LAMP1P11279 417 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 POU2F1P14859 743 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 RGNQ15493 299 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 PAMR1Q6UXH9 720 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 TMPRSS11BQ86T26 416 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 SLC44A2Q8IWA5 706 aaPredicted RBP17.81■□□□□ 0.44
PSPC1-201ENST00000338910 GDPD1Q8N9F7 314 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 OR7G3Q8NG95 312 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 DEDD2Q8WXF8 326 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 MAP6Q96JE9 813 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 ZNF717Q9BY31 904 aaPredicted RBP17.81■□□□□ 0.44
PSPC1-201ENST00000338910 ZNF556Q9HAH1 456 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 DIABLOQ9NR28 239 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 SPATA6Q9NWH7 488 aaPredicted RBP17.81■□□□□ 0.44
PSPC1-201ENST00000338910 CLN6Q9NWW5 311 aa17.81■□□□□ 0.44
PSPC1-201ENST00000338910 ZAR1LA6NP61 321 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 POLR1CO15160 346 aaPredicted RBP17.8■□□□□ 0.44
PSPC1-201ENST00000338910 MPZL2O60487 215 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 OPN1SWP03999 348 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 FHP07954 510 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 CPN2P22792 545 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 OR1E2P47887 323 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 TBPL1P62380 186 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 ACSM2AQ08AH3 577 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.8■□□□□ 0.444e-11■□□□□ 9.3
PSPC1-201ENST00000338910 ACSM2BQ68CK6 577 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 PTCHD4Q6ZW05 846 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 HUS1BQ8NHY5 278 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 SH3KBP1Q96B97 665 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 FTSJ1Q9UET6 329 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 STUB1Q9UNE7 303 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 SH2B3Q9UQQ2 575 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 A0A1W2PQ72 361 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 HYKKA2RU49 373 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 IGLON5A6NGN9 336 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 ARHGEF9O43307 516 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 CSO75390 466 aaKnown RBP17.8■□□□□ 0.44
PSPC1-201ENST00000338910 C1QBP02746 253 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 NPPBP16860 134 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 ALAS2P22557 587 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 MAPK9P45984 424 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 QPRTQ15274 297 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 TEAD4Q15561 434 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 FAM83HQ6ZRV2 1179 aaPredicted RBP17.8■□□□□ 0.44
PSPC1-201ENST00000338910 C11orf65Q8NCR3 313 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 SLC25A46Q96AG3 418 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 ELSPBP1Q96BH3 223 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 MSLNLQ96KJ4 702 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 MAPKAP1Q9BPZ7 522 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 CLEC2DQ9UHP7 191 aa17.8■□□□□ 0.44
PSPC1-201ENST00000338910 FABP12A6NFH5 140 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 PCDH7O60245 1069 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 CKMT1AP12532 417 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 ADAM15Q13444 863 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 SPHARQ15513 63 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 IFI44LQ53G44 452 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 PDZK1Q5T2W1 519 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 SLCO4C1Q6ZQN7 724 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 ZNF767PQ75MW2 155 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 NAGSQ8N159 534 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 C2orf73Q8N5S3 287 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-201ENST00000338910 GPR156Q8NFN8 814 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 NLGN4YQ8NFZ3 816 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-201ENST00000338910 CREB3L4Q8TEY5 395 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 GTPBP3Q969Y2 492 aaKnown RBP17.79■□□□□ 0.44
PSPC1-201ENST00000338910 S1PR5Q9H228 398 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 SLC25A19Q9HC21 320 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 NDUFB11Q9NX14 153 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 MAPRE3Q9UPY8 281 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 MID1O15344 667 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 TMCC2O75069 709 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 TRIM3O75382 744 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-201ENST00000338910 PCDH8O95206 1070 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 LGI1O95970 557 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 PCCBP05166 539 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 CBLP22681 906 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 CSTF2P33240 577 aaKnown RBP eCLIP17.79■□□□□ 0.44
PSPC1-201ENST00000338910 CNR2P34972 360 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 GAB1Q13480 694 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 GPR19Q15760 415 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 TATDN3Q17R31 274 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 PIP5KL1Q5T9C9 394 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 TRIM69Q86WT6 500 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms