RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CEPT1Q9Y6K0 416 aa13.13□□□□□ -0.31
RTN4-202ENST00000337526 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 SLC22A31A6NKX4 558 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 CHP2O43745 196 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 TOXO94900 526 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 PTTG1O95997 202 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 CSTAP01040 98 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 DNASE1P24855 282 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 HRH2P25021 359 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 RELAQ04206 551 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 MANEALQ5VSG8 457 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 ASPGQ86U10 573 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 MDGA1Q8NFP4 955 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 OR9Q2Q8NGE9 314 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 RBCK1Q9BYM8 510 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 NLKQ9UBE8 527 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 INTS6Q9UL03 887 aaKnown RBP13.12□□□□□ -0.31
RTN4-202ENST00000337526 SOX1O00570 391 aaPredicted RBP13.12□□□□□ -0.31
RTN4-202ENST00000337526 PCDH17O14917 1159 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 IL7P13232 177 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 OSMP13725 252 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 UBXN2BQ14CS0 331 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 TRAM1Q15629 374 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 LDLRAD1Q5T700 205 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 RPL13AP3Q6NVV1 102 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 TMEM53Q6P2H8 277 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 TSTD1Q8NFU3 115 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
RTN4-202ENST00000337526 MYH1P12882 1939 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 LOC285095A0A1B0GVY8 99 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 UNC119BA6NIH7 251 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 PLD2O14939 933 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 NKX2-5P52952 324 aaPredicted RBP13.12□□□□□ -0.31
RTN4-202ENST00000337526 ATXN7L3Q14CW9 347 aaPredicted RBP13.12□□□□□ -0.31
RTN4-202ENST00000337526 CDKL4Q5MAI5 379 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 TMEM25Q86YD3 366 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 OR8K5Q8NH50 307 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 PROKR1Q8TCW9 393 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 ACOT12Q8WYK0 555 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 RBP7Q96R05 134 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 PCDHGB2Q9Y5G2 931 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 WASH4PA8MWX3 477 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 PRKYO43930 277 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 CSTBP04080 98 aaKnown RBP13.12□□□□□ -0.31
RTN4-202ENST00000337526 ZNF33BQ06732 778 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 GRK1Q15835 563 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 TCEAL6Q6IPX3 200 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 GRHL2Q6ISB3 625 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 PNCKQ6P2M8 343 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 CBARPQ8N350 705 aaPredicted RBP13.12□□□□□ -0.31
RTN4-202ENST00000337526 CHST14Q8NCH0 376 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 HCAR2Q8TDS4 363 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 OR2M4Q96R27 311 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 C11orf49Q9H6J7 331 aa13.12□□□□□ -0.31
RTN4-202ENST00000337526 A0A1W2PP55 124 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 EIF1AYO14602 144 aaKnown RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 PRLP01236 227 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 SRCP12931 536 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 MAGEA8P43361 318 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 GPR4P46093 362 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 GAS6Q14393 721 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 MICAQ29983 383 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 ALG1LQ6GMV1 187 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 RAB12Q6IQ22 244 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 UNC5DQ6UXZ4 953 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 AVL9Q8NBF6 648 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 OR56A3Q8NH54 315 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 CASTOR1Q8WTX7 329 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 TMEM41AQ96HV5 264 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 ZNF300Q96RE9 604 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 CACNG6Q9BXT2 260 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 TREM1Q9NP99 234 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 NPIPB15A6NHN6 443 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 GPR37L1O60883 481 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 ITGA5P08648 1049 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 ALDOCP09972 364 aaKnown RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 KEAP1Q14145 624 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 GRM2Q14416 872 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.11□□□□□ -0.315e-18■□□□□ 10.6
RTN4-202ENST00000337526 LRRC25Q8N386 305 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 OR8S1Q8NH09 359 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 GORASP2Q9H8Y8 452 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 C5AR2Q9P296 337 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 PLEKHA6Q9Y2H5 1048 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 GPR52Q9Y2T5 361 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 TRBV2A0A0J9YWF9 115 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 A0A1W2PQL4 384 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 ZNF208O43345 1280 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 SMAD6O43541 496 aaKnown RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 ADH1BP00325 375 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 C6P13671 934 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 NTRK2Q16620 822 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 TMEM35AQ53FP2 167 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 METTL2BQ6P1Q9 378 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms