RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 GNA13Q14344 377 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ODF4Q2M2E3 257 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 CRTC2Q53ET0 693 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF311Q5JNZ3 666 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 FAM26DQ5JW98 314 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PRSS36Q5K4E3 855 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 NXNL2Q5VZ03 156 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 TMEM107Q6UX40 140 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 MFSD4AQ8N468 514 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 OR10H4Q8NGA5 316 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 OR5D16Q8NGK9 328 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 OR6K6Q8NGW6 343 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 THAP3Q8WTV1 239 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 TRIM43Q96BQ3 446 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ARSGQ96EG1 525 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 KCNH6Q9H252 994 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 TRPS1Q9UHF7 1281 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ENOPH1Q9UHY7 261 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF225Q9UK10 706 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SPIN1Q9Y657 262 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 UNC13CQ8NB66 2214 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 MEIOCA2RUB1 952 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 GABRR3A8MPY1 467 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 HAT1O14929 419 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 KHNYNO15037 678 aaKnown RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PTTG1O95997 202 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 C1SP09871 688 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PVRP15151 417 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 UQCRC1P31930 480 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 TNFSF8P32971 234 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SLC9A3P48764 834 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 RPL34P49207 117 aaKnown RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 VSX2P58304 361 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SMIM11AP58511 58 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 STXBP1P61764 594 aaKnown RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ABATP80404 500 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 HNRNPA0Q13151 305 aaKnown RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF267Q14586 743 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 LARS2Q15031 903 aaKnown RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 WDR45BQ5MNZ6 344 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ALKBH2Q6NS38 261 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 CDC73Q6P1J9 531 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 PNCKQ6P2M8 343 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 RIMKLAQ8IXN7 391 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 LRRC20Q8TCA0 184 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 FKBP10Q96AY3 582 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 OR5M11Q96RB7 305 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SLC17A9Q9BYT1 436 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SERHL2Q9H4I8 314 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 CWH43Q9H720 699 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SERHLQ9NQF3 203 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 HEBP1Q9NRV9 189 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 SLC6A13Q9NSD5 602 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 CUEDC1Q9NWM3 386 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 FAM120CQ9NX05 1096 aaKnown RBP6.17□□□□□ -1.42
HMG20A-201ENST00000336216 ING3Q9NXR8 418 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 GSTK1Q9Y2Q3 226 aa6.17□□□□□ -1.42
HMG20A-201ENST00000336216 A0A1W2PQ09 198 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 RHPN2P1A8MT19 583 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 RNGTTO60942 597 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 PRSS23O95084 383 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 CRYZL1O95825 349 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 TFPIP10646 304 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 HOXC13P31276 330 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 RAB14P61106 215 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SLC35A2P78381 396 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 FCHO2Q0JRZ9 810 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 PIN1Q13526 163 aaPredicted RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 HNRNPA1L2Q32P51 320 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 FIGNL1Q6PIW4 674 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 RFPL4BQ6ZWI9 263 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 C6orf120Q7Z4R8 191 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 TSPYL5Q86VY4 417 aaPredicted RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 POMGNT2Q8NAT1 580 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 TSTD1Q8NFU3 115 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 OR51A7Q8NH64 312 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 ASB11Q8WXH4 323 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 NXPE3Q969Y0 559 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 CCDC120Q96HB5 630 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 FRMD6Q96NE9 622 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 WACQ9BTA9 647 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SPRTNQ9H040 489 aaPredicted RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 BRD7Q9NPI1 651 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 PNO1Q9NRX1 252 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 NLKQ9UBE8 527 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 IKZF2Q9UKS7 526 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 MRPS33Q9Y291 106 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 TCRBV21S2A2A0A5A6 115 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 UPK1AO00322 258 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 B3GALT2O43825 422 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 PRKRAO75569 313 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 PEX11BO96011 259 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 NPPAP01160 153 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 HIST1H2ABP04908 130 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 H1F0P07305 194 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 RPS3P23396 243 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 DDX6P26196 483 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 AOAHP28039 575 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 AKT2P31751 481 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 XKP51811 444 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms