RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 LAPTM5Q13571 262 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ZKSCAN8Q15776 578 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TYSND1Q2T9J0 566 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ADCK5Q3MIX3 580 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TDRG1Q3Y452 100 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 FSCBQ5H9T9 825 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 BEND6Q5SZJ8 279 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TSTD2Q5T7W7 516 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ACSM5Q6NUN0 579 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 BZW1Q7L1Q6 419 aaKnown RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CENPVQ7Z7K6 275 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 GALNT5Q7Z7M9 940 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 FJX1Q86VR8 437 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CHSY1Q86X52 802 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 FAM90A1Q86YD7 464 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CEP57L1Q8IYX8 460 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 C3orf56Q8N813 242 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 SLC38A9Q8NBW4 561 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 OR9A2Q8NGT5 310 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TBC1D15Q8TC07 691 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 SLC25A43Q8WUT9 341 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 HTRA1Q92743 480 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 MR1Q95460 341 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 RILPL2Q969X0 211 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ARL8AQ96BM9 186 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 FOXRED1Q96CU9 486 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 JAKMIP1Q96N16 626 aaKnown RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 FAM210AQ96ND0 272 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 OR2A5Q96R48 311 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ULBP1Q9BZM6 244 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 SLC25A51Q9H1U9 297 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 EGLN3Q9H6Z9 239 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 SNX15Q9NRS6 342 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 VPS54Q9P1Q0 977 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 GPR160Q9UJ42 338 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 MCM8Q9UJA3 840 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ZKSCAN5Q9Y2L8 839 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 GDAQ9Y2T3 454 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CAB39Q9Y376 341 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 FLVCR1Q9Y5Y0 555 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 A0A088AWK7 358 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 A0A096LPI6 279 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 A0A0G2JMP0 313 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 A0A0X1KG70 313 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 SPRR5A0A1B0GTR4 108 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 A0A1W2PPV9 198 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 MEGF11A6BM72 1044 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 C2CD4BA6NLJ0 364 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 VSTM5A8MXK1 200 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 K7ENM7 598 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TP53I11O14683 189 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 FOXS1O43638 330 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF500O60304 480 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 PRSS23O95084 383 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 NDUFB8O95169 186 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 PCDH8O95206 1070 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TIAF1O95411 115 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 PMS2P2O95744 297 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 WNT11O96014 354 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 IL1BP01584 269 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 IGKV3-15P01624 115 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 IGLV1-47P01700 117 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CALB1P05937 261 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 F7P08709 466 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 C8orf89P0DMQ9 161 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF250P15622 560 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF10P21506 573 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 PSMC2P35998 433 aaKnown RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CCL11P51671 97 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 NAP1L1P55209 391 aaKnown RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 RAG2P55895 527 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CHRNEQ04844 493 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TNFRSF9Q07011 255 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 BCL2L1Q07817 233 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 MYBPHQ13203 477 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 GTF2H3Q13889 308 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 MFSD13AQ14CX5 517 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 RNF212Q495C1 297 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 DCST1Q5T197 706 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ATPAF1Q5TC12 328 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 DUPD1Q68J44 220 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 C16orf87Q6PH81 154 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 SNX32Q86XE0 403 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 KRT73Q86Y46 540 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CPNE8Q86YQ8 564 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 FAM71AQ8IYT1 594 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 LGI2Q8N0V4 545 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 GTPBP8Q8N3Z3 284 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TRPV3Q8NET8 790 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 OR4M2Q8NGB6 313 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 OR51D1Q8NGF3 324 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ARRDC2Q8TBH0 407 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 NTN5Q8WTR8 489 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 SMAP2Q8WU79 429 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TANKQ92844 425 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 GAL3ST3Q96A11 431 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 SLC25A28Q96A46 364 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 C12orf43Q96C57 262 aaKnown RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ELMO2Q96JJ3 720 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms