RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TMEM245Q9H330 911 aa16.48■□□□□ 0.23
COL9A1-201ENST00000320755 PRSS16Q9NQE7 514 aa16.48■□□□□ 0.23
COL9A1-201ENST00000320755 FBXW2Q9UKT8 454 aa16.48■□□□□ 0.23
COL9A1-201ENST00000320755 A0A1W2PPV9 198 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 A8MVJ9 347 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 LOC110117498-PIK3R3F6TDL0 507 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 MID1O15344 667 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 FRS3O43559 492 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 SSX4O60224 188 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 NFATC1O95644 943 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 HNRNPA1P09651 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL9A1-201ENST00000320755 NKX2-5P52952 324 aaPredicted RBP16.47■□□□□ 0.23
COL9A1-201ENST00000320755 LIPKQ5VXJ0 399 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 NCCRP1Q6ZVX7 275 aaPredicted RBP16.47■□□□□ 0.23
COL9A1-201ENST00000320755 SLC30A8Q8IWU4 369 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 OR8K5Q8NH50 307 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 BADQ92934 168 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 QRFPRQ96P65 431 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 INSM2Q96T92 566 aaPredicted RBP16.47■□□□□ 0.23
COL9A1-201ENST00000320755 TSSK6Q9BXA6 273 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 POLR2J2Q9GZM3 115 aaKnown RBP16.47■□□□□ 0.23
COL9A1-201ENST00000320755 CNOT2Q9NZN8 540 aaKnown RBP16.47■□□□□ 0.23
COL9A1-201ENST00000320755 MGAT4BQ9UQ53 548 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 PEX16Q9Y5Y5 336 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 SAGE2PA6NJ88 616 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 C1QTNF3-AMACRE9PGA6 284 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 PGRMC2O15173 223 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 PDE9AO76083 593 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 SEMA3DO95025 777 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 NTN1O95631 604 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 ILKQ13418 452 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 SPHARQ15513 63 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 ZNF181Q2M3W8 571 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 TMEM52BQ4KMG9 183 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 OR4C11Q6IEV9 310 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 IQCHQ86VS3 1027 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 CERS4Q9HA82 394 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 HHATLQ9HCP6 504 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 RPN2P04844 631 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 PTNP21246 168 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 AZGP1P25311 298 aaKnown RBP16.47■□□□□ 0.23
COL9A1-201ENST00000320755 RPS19P39019 145 aaKnown RBP16.47■□□□□ 0.23
COL9A1-201ENST00000320755 CSNK1G2P78368 415 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 ZNF91Q05481 1191 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 GAB4Q2WGN9 574 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 TIMM50Q3ZCQ8 353 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 GPAT3Q53EU6 434 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 ZNF793Q6ZN11 406 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 ABHD8Q96I13 439 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 COX14Q96I36 57 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 P2RX2Q9UBL9 471 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 CARD8Q9Y2G2 431 aa16.47■□□□□ 0.23
COL9A1-201ENST00000320755 REV3LO60673 3130 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 FAAHO00519 579 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 KIAA0355O15063 1070 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 ERI3O43414 337 aaKnown RBP16.46■□□□□ 0.23
COL9A1-201ENST00000320755 PRKYO43930 277 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 CSO75390 466 aaKnown RBP16.46■□□□□ 0.23
COL9A1-201ENST00000320755 RAB8AP61006 207 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 ZNF45Q02386 682 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 SELENBP1Q13228 472 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 CCBE1Q6UXH8 406 aaPredicted RBP16.46■□□□□ 0.23
COL9A1-201ENST00000320755 OR4K5Q8NGD3 323 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 OR6T1Q8NGN1 323 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 GANCQ8TET4 914 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 C16orf58Q96GQ5 468 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 TMEM80Q96HE8 168 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 PELI2Q9HAT8 420 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 CCDC59Q9P031 241 aaKnown RBP16.46■□□□□ 0.23
COL9A1-201ENST00000320755 ANKMY1Q9P2S6 941 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 SERGEFQ9UGK8 458 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 TMEM221A6NGB7 291 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 GSTM5P46439 218 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 MLLT1Q03111 559 aaPredicted RBP16.46■□□□□ 0.23
COL9A1-201ENST00000320755 RPA4Q13156 261 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 GINS1Q14691 196 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 TRMT61AQ96FX7 289 aaKnown RBP16.46■□□□□ 0.23
COL9A1-201ENST00000320755 AMDHD1Q96NU7 426 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 POU2F3Q9UKI9 436 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 A4GNTQ9UNA3 340 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 CFL2Q9Y281 166 aa16.46■□□□□ 0.23
COL9A1-201ENST00000320755 DSPPQ9NZW4 1301 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 KIAA1549LQ6ZVL6 1849 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 IGKV1-8A0A0C4DH67 115 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 PDZK1P1A8MUH7 402 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 LRRTM2O43300 516 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 MMP11P24347 488 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 PPP2R1BP30154 601 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 CSTF2P33240 577 aaKnown RBP eCLIP16.45■□□□□ 0.22
COL9A1-201ENST00000320755 REEP5Q00765 189 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 MLF2Q15773 248 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-201ENST00000320755 PIP5KL1Q5T9C9 394 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 GET4Q7L5D6 327 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-201ENST00000320755 ZER1Q7Z7L7 766 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 TP53I13Q8NBR0 393 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-201ENST00000320755 ITPKCQ96DU7 683 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 SLC6A18Q96N87 628 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 GPA33Q99795 319 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 MENTQ9BUN1 341 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 AICDAQ9GZX7 198 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms