RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 OPALINQ96PE5 141 aa13.02□□□□□ -0.32
ATG4C-201ENST00000317868 C1QTNF2Q9BXJ5 285 aa13.02□□□□□ -0.32
ATG4C-201ENST00000317868 PLA2G2FQ9BZM2 168 aa13.02□□□□□ -0.32
ATG4C-201ENST00000317868 ARMC7Q9H6L4 198 aa13.02□□□□□ -0.32
ATG4C-201ENST00000317868 RNF167Q9H6Y7 350 aa13.02□□□□□ -0.32
ATG4C-201ENST00000317868 SYNPO2LQ9H987 977 aa13.02□□□□□ -0.32
ATG4C-201ENST00000317868 ISPDA4D126 451 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 ENTPD6O75354 484 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 ACP5P13686 325 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 AHRP35869 848 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 UGT2B15P54855 530 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 SOWAHCQ53LP3 525 aaPredicted RBP13.02□□□□□ -0.33
ATG4C-201ENST00000317868 PERM1Q5SV97 790 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 PRAMEF8Q5VWM4 474 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 PRAMEF7Q5VXH5 474 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 GET4Q7L5D6 327 aaPredicted RBP13.02□□□□□ -0.33
ATG4C-201ENST00000317868 MORN4Q8NDC4 146 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 OR5D16Q8NGK9 328 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 MGLLQ99685 303 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 C17orf62Q9BQA9 187 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 TWSG1Q9GZX9 223 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 RACGAP1Q9H0H5 632 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 MVB12BQ9H7P6 319 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 SEC14L3Q9UDX4 400 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 TMCC3Q9ULS5 477 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 ADAM23O75077 832 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 PCDH8O95206 1070 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 IGFBP1P08833 259 aaPredicted RBP13.02□□□□□ -0.33
ATG4C-201ENST00000317868 SMIM11AP58511 58 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 DUSP2Q05923 314 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 GPM6BQ13491 265 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 TP53BP2Q13625 1128 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 INAVAQ3KP66 663 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 SPDYE7PQ495Y7 208 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 KIAA1211LQ6NV74 962 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 ABHD17CQ6PCB6 329 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 LYSMD2Q8IV50 215 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 AMER2Q8N7J2 671 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 PHPT1Q9NRX4 125 aaPredicted RBP13.02□□□□□ -0.33
ATG4C-201ENST00000317868 SEMA3GQ9NS98 782 aa13.02□□□□□ -0.33
ATG4C-201ENST00000317868 TRNAU1APQ9NX07 287 aaKnown RBP13.02□□□□□ -0.33
ATG4C-201ENST00000317868 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 SLC28A2O43868 658 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 CNOT3O75175 753 aaKnown RBP13.01□□□□□ -0.33
ATG4C-201ENST00000317868 LGI1O95970 557 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 SCG5P05408 212 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 CHRM4P08173 479 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 TSFMP43897 325 aaKnown RBP13.01□□□□□ -0.33
ATG4C-201ENST00000317868 KHKP50053 298 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 ERVK-21P61565 698 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 ZNF181Q2M3W8 571 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 MFSD4BQ5TF39 518 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 OR52E1Q8NGJ3 308 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 CNRIP1Q96F85 164 aaPredicted RBP13.01□□□□□ -0.33
ATG4C-201ENST00000317868 SP140LQ9H930 580 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 HHATLQ9HCP6 504 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 C11orf16Q9NQ32 467 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 IRAK4Q9NWZ3 460 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 SCHIP1Q9P0W5 487 aaPredicted RBP13.01□□□□□ -0.33
ATG4C-201ENST00000317868 A0A1W2PP55 124 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 A0A1W2PR48 441 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 CCRL2O00421 344 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 HAT1O14929 419 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 PRKRAO75569 313 aaKnown RBP13.01□□□□□ -0.33
ATG4C-201ENST00000317868 IMPDH2P12268 514 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 HOXB3P14651 431 aaPredicted RBP13.01□□□□□ -0.33
ATG4C-201ENST00000317868 HIST1H1TP22492 207 aaPredicted RBP13.01□□□□□ -0.33
ATG4C-201ENST00000317868 SSR2P43308 183 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 ABATP80404 500 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 NCF4Q15080 339 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 ZNF425Q6IV72 752 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 C1orf94Q6P1W5 598 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 DEF8Q6ZN54 512 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 HDDC3Q8N4P3 179 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 FAIM2Q9BWQ8 316 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 XKR8Q9H6D3 395 aa13.01□□□□□ -0.33
ATG4C-201ENST00000317868 SAGE2PA6NJ88 616 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 WASHC1A8K0Z3 465 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 CASC3O15234 703 aaKnown RBP13□□□□□ -0.33
ATG4C-201ENST00000317868 ZSCAN9O15535 394 aaPredicted RBP13□□□□□ -0.33
ATG4C-201ENST00000317868 PLRG1O43660 514 aaKnown RBP13□□□□□ -0.33
ATG4C-201ENST00000317868 CSTF2P33240 577 aaKnown RBP eCLIP13□□□□□ -0.33
ATG4C-201ENST00000317868 IGFALSP35858 605 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 XKP51811 444 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 ZNF45Q02386 682 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 GPR19Q15760 415 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 WASH2PQ6VEQ5 465 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 MRGPREQ86SM8 312 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 CADM3Q8N126 398 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 LINC00471Q8N535 108 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 OR2L3Q8NG85 312 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 OR8J1Q8NGP2 316 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 VANGL1Q8TAA9 524 aaPredicted RBP13□□□□□ -0.33
ATG4C-201ENST00000317868 MOAP1Q96BY2 351 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 Q96MT0 163 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 TRNT1Q96Q11 434 aaKnown RBP13□□□□□ -0.33
ATG4C-201ENST00000317868 PRKAG2Q9UGJ0 569 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 PLEKHM1Q9Y4G2 1056 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 A0A0G2JN53 185 aa13□□□□□ -0.33
ATG4C-201ENST00000317868 M0R3H8 397 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms