RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 EFNA1P20827 205 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-201ENST00000317677 IDSP22304 550 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 GTF2E2P29084 291 aaKnown RBP12.38□□□□□ -0.43
CPNE1-201ENST00000317677 PIK3CBP42338 1070 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 KIR3DL1P43629 444 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 NUBP1P53384 320 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 REEP5Q00765 189 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 LAPTM5Q13571 262 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 PRSS53Q2L4Q9 553 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 SPIN4Q56A73 249 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 ZC3H12BQ5HYM0 836 aaKnown RBP12.38□□□□□ -0.43
CPNE1-201ENST00000317677 OTUD3Q5T2D3 398 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-201ENST00000317677 ZNF691Q5VV52 312 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 TIGD3Q6B0B8 471 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 ZNF517Q6ZMY9 492 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-201ENST00000317677 COMMD6Q7Z4G1 85 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 CALHM3Q86XJ0 350 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 TCTE3Q8IZS6 198 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 CLECL1Q8IZS7 167 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 FAM9CQ8IZT9 166 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 FRMD1Q8N878 549 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 ZNF548Q8NEK5 533 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-201ENST00000317677 OR4K1Q8NGD4 311 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 OR2A1Q8NGT9 310 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 OR10A6Q8NH74 314 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 SLC7A6Q92536 515 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 TMCO6Q96DC7 493 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 WDR92Q96MX6 357 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 TM9SF2Q99805 663 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 UGT2B28Q9BY64 529 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 AMBRA1Q9C0C7 1298 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 NUAK2Q9H093 628 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 DCSTAMPQ9H295 470 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 NIPAL2Q9H841 368 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 CCDC59Q9P031 241 aaKnown RBP12.38□□□□□ -0.43
CPNE1-201ENST00000317677 LINC00862A6NCI5 91 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 H7BY64 318 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 KCNJ13O60928 360 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 ERN1O75460 977 aaKnown RBP12.38□□□□□ -0.43
CPNE1-201ENST00000317677 IGLV3-19P01714 112 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 HSD17B2P37059 387 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 RAB28P51157 221 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 LSM3P62310 102 aaKnown RBP12.38□□□□□ -0.43
CPNE1-201ENST00000317677 CDK5R2Q13319 367 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 FZD5Q13467 585 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 HIST2H2AA3Q6FI13 130 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 GPR155Q7Z3F1 870 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 SLC22A18ASQ8N1D0 253 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 CLEC4FQ8N1N0 589 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 OR8J2Q8NGG1 315 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 MSANTD3Q96H12 275 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 ITCHQ96J02 903 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 PRAP1Q96NZ9 151 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 RHBGQ9H310 441 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 WNT16Q9UBV4 365 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 TPRKBQ9Y3C4 175 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 SLCO1B1Q9Y6L6 691 aa12.38□□□□□ -0.43
CPNE1-201ENST00000317677 LRRC72A6NJI9 287 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 PTGES3LE9PB15 166 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 LCMT2O60294 686 aaKnown RBP12.37□□□□□ -0.43
CPNE1-201ENST00000317677 APBB3O95704 486 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 COX7A2P14406 83 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 GGT1P19440 569 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 AGXTP21549 392 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 ALDH4A1P30038 563 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 AVPR2P30518 371 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 TPD52P55327 224 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-201ENST00000317677 CYP4F2P78329 520 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 CSNK1G2P78368 415 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 SLC35A2P78381 396 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 MC1RQ01726 317 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 FAPQ12884 760 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 BAMBIQ13145 260 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 ALG11Q2TAA5 492 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 GPAT3Q53EU6 434 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 C10orf62Q5T681 223 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-201ENST00000317677 GLYATQ6IB77 296 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 MSANTD1Q6ZTZ1 278 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 RD3Q7Z3Z2 195 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 CAMKMTQ7Z624 323 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 NRROSQ86YC3 692 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 ZDHHC13Q8IUH4 622 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 OR2L8Q8NGY9 312 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 LRRC20Q8TCA0 184 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 NELL1Q92832 810 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 TMBIM1Q969X1 311 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 DMRTB1Q96MA1 342 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 MS4A8Q9BY19 250 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 CCDC90BQ9GZT6 254 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 AICDAQ9GZX7 198 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 TMEM168Q9H0V1 697 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 SYNPO2LQ9H987 977 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 SPHK1Q9NYA1 384 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 GLTPQ9NZD2 209 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 CA14Q9ULX7 337 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 CYP8B1Q9UNU6 501 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 HSPE1-MOB4S4R3N1 261 aa12.37□□□□□ -0.43
CPNE1-201ENST00000317677 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 A6NCN8 305 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 TGFBR2P37173 567 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms