RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 ZNF730Q6ZMV8 503 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 AKAP1Q92667 903 aaKnown RBP eCLIP12.05□□□□□ -0.481e-7■■■■□ 25.6
RETREG3-201ENST00000309428 CRELD1Q96HD1 420 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 QRSL1Q9H0R6 528 aaKnown RBP12.05□□□□□ -0.48
RETREG3-201ENST00000309428 ZFR2Q9UPR6 939 aaKnown RBP12.05□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF860A6NHJ4 632 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 EEF1E1O43324 174 aaKnown RBP12.05□□□□□ -0.48
RETREG3-201ENST00000309428 GMFGO60234 142 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 TIMP2P16035 220 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 HBA1P69905 142 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF791Q3KP31 576 aaPredicted RBP12.05□□□□□ -0.48
RETREG3-201ENST00000309428 LYPD8Q6UX82 237 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 SLC46A3Q7Z3Q1 461 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 YAF2Q8IY57 180 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 C7orf61Q8IZ16 206 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 LSM14AQ8ND56 463 aaKnown RBP12.05□□□□□ -0.48
RETREG3-201ENST00000309428 ZCCHC10Q8TBK6 192 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF480Q8WV37 535 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 RASSF5Q8WWW0 418 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 TADA1Q96BN2 335 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 C17orf62Q9BQA9 187 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 ABCG5Q9H222 651 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 CLMPQ9H6B4 373 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 EXTL2Q9UBQ6 330 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 SESN1Q9Y6P5 492 aa12.05□□□□□ -0.48
RETREG3-201ENST00000309428 PDPK1O15530 556 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF821O75541 412 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 C8GP07360 202 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 PRG2P13727 222 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 AMD1P17707 334 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 HTR3AP46098 478 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 SMSP52788 366 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 SLC3A1Q07837 685 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 MAP4K2Q12851 820 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 CDK10Q15131 360 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF750Q32MQ0 723 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 COMMD6Q7Z4G1 85 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 PIAS4Q8N2W9 510 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 OR10H4Q8NGA5 316 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 OR5D16Q8NGK9 328 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 CXorf40AQ8TE69 158 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 CNDP2Q96KP4 475 aaKnown RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 CUEDC1Q9NWM3 386 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 NFKBIL1Q9UBC1 381 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 RPL36Q9Y3U8 105 aaKnown RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 SLC16A6O15403 523 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 HYAL3O43820 417 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 RLN1P04808 185 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 VIPR1P32241 457 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 CRISP1P54107 249 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 PFN3P60673 137 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 PIN1Q13526 163 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 IRF5Q13568 498 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 KEAP1Q14145 624 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 DHCR24Q15392 516 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 CDC73Q6P1J9 531 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 MACC1Q6ZN28 852 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 IQCHQ86VS3 1027 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 PLA2G15Q8NCC3 412 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 FAM46DQ8NEK8 389 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 UFD1Q92890 307 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 RAD51AP1Q96B01 352 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 TMEM80Q96HE8 168 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 SLC38A2Q96QD8 506 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 CPPED1Q9BRF8 314 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 GALNT9Q9HCQ5 603 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 FBXO8Q9NRD0 319 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 PLEKHM1Q9Y4G2 1056 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 DOCK9Q9BZ29 2069 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 IGLON5A6NGN9 336 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 FGBP02675 491 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 EVI2BP34910 448 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 GRK5P34947 590 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 GGT2P36268 569 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 SSR2P43308 183 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF542PQ5EBM4 170 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 ANKRD54Q6NXT1 300 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 ADGRD2Q7Z7M1 963 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 SAMD12Q8N8I0 201 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 OR14C36Q8NHC7 312 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 TRIM43Q96BQ3 446 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 OR4K3Q96R72 315 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 SLC12A9Q9BXP2 914 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 TTYH1Q9H313 450 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-201ENST00000309428 GULP1Q9UBP9 304 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 NCKAP1Q9Y2A7 1128 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 PCDHGA6Q9Y5G7 932 aa12.04□□□□□ -0.48
RETREG3-201ENST00000309428 CLDN24A6NM45 220 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 PRRT4C9JH25 899 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 MID1O15344 667 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 SOCS5O75159 536 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 PRKCAP17252 672 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 PPIBP23284 216 aaKnown RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 CENPAP49450 140 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 STX4Q12846 297 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 FAM205BPQ63HN1 556 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 CNIH2Q6PI25 160 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TMEM145Q8NBT3 493 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms