RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ADAMTS9Q9P2N4 1935 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 RP1P56715 2156 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 TMEM8BA6NDV4 472 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 SLC9B1P1A6NJY1 282 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 H0YAE9 185 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 hCG_2039718K7EN88 272 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 M0QX08 132 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 PLOD2O00469 737 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 DNAJB6O75190 326 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 E2F6O75461 281 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 SNAP29O95721 258 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 OPN1SWP03999 348 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 EIF2S1P05198 315 aaKnown RBP11.18□□□□□ -0.62
TRIM40-205ENST00000307859 FHP07954 510 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 C8orf89P0DMQ9 161 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 THRBP10828 461 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 MYF6P23409 242 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 TLX1P31314 330 aaPredicted RBP11.18□□□□□ -0.62
TRIM40-205ENST00000307859 KHKP50053 298 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 LIMK1P53667 647 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 ADARB1P78563 741 aaKnown RBP11.18□□□□□ -0.62
TRIM40-205ENST00000307859 GPR19Q15760 415 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 IFI44LQ53G44 452 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 TSSK4Q6SA08 328 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 PRSS41Q7RTY9 318 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 TSEN54Q7Z6J9 526 aaKnown RBP11.18□□□□□ -0.62
TRIM40-205ENST00000307859 HS3ST5Q8IZT8 346 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 LZICQ8WZA0 190 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 ELP4Q96EB1 424 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 NRBF2Q96F24 287 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 TCTN2Q96GX1 697 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 TMEM19Q96HH6 336 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 MAP3K3Q99759 626 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 RBM4BQ9BQ04 359 aaKnown RBP11.18□□□□□ -0.62
TRIM40-205ENST00000307859 CCDC3Q9BQI4 270 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 RBM4Q9BWF3 364 aaKnown RBP11.18□□□□□ -0.62
TRIM40-205ENST00000307859 NPLQ9BXD5 320 aaPredicted RBP11.18□□□□□ -0.62
TRIM40-205ENST00000307859 CHRNA10Q9GZZ6 450 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 OR51I1Q9H343 314 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 THSD1Q9NS62 852 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 TMEM74BQ9NUR3 256 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 BAG5Q9UL15 447 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 ASXL3Q9C0F0 2248 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 ZFYVE26Q68DK2 2539 aa11.18□□□□□ -0.62
TRIM40-205ENST00000307859 A0A1B0GVT2 93 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 TLCD2A6NGC4 264 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 ZNF860A6NHJ4 632 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 EMC8O43402 210 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 SRPX2O60687 465 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 PDE9AO76083 593 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 TNFAIP8O95379 198 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 PGM3O95394 542 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 BCHEP06276 602 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 SMIM18P0DKX4 95 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 ALPPL2P10696 532 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 FPR1P21462 350 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 MATN1P21941 496 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 DNAJA1P31689 397 aaKnown RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 CTSKP43235 329 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 GABRA4P48169 554 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 FNTBP49356 437 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 ANXA11P50995 505 aaKnown RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 OLR1P78380 273 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 PRR5P85299 388 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 EPS8Q12929 822 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 DEFB110Q30KQ9 67 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 C6orf132Q5T0Z8 1188 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 TMEM107Q6UX40 140 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 PRR23CQ6ZRP0 262 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 USP53Q70EK8 1073 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 USP51Q70EK9 711 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 WDR5BQ86VZ2 330 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 ARMC8Q8IUR7 673 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 MCATQ8IVS2 390 aaKnown RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 ST13P4Q8IZP2 240 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 CA13Q8N1Q1 262 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 LRRC25Q8N386 305 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 OR4K14Q8NGD5 310 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 OR9A2Q8NGT5 310 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 GEMIN6Q8WXD5 167 aaKnown RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 RAB8BQ92930 207 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 ZNF285Q96NJ3 590 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 CD180Q99467 661 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 SMURF2Q9HAU4 748 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 IL21RQ9HBE5 538 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 PNPLA3Q9NST1 481 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 NTMQ9P121 344 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 P2RX2Q9UBL9 471 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 EPHA6Q9UF33 1036 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 NAALAD2Q9Y3Q0 740 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 SPACA6W5XKT8 324 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 NUP210LQ5VU65 1888 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 A0A1B0GTW7 788 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 PRAMEF27A3QJZ7 478 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 C5orf58C9J3I9 102 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 CYR61O00622 381 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 DIRAS1O95057 198 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 C9P02748 559 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 ALBP02768 609 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 GNAO1P09471 354 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms