RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 WFDC6Q9BQY6 131 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 SLC22A4Q9H015 551 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 MED20Q9H944 212 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 FAM120CQ9NX05 1096 aaKnown RBP13.85□□□□□ -0.19
PTPN9-201ENST00000306726 ISPDA4D126 451 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 TEX28O15482 410 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 SSNA1O43805 119 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 REM1O75628 298 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 OR2B3O76000 313 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 H1F0P07305 194 aaKnown RBP13.85□□□□□ -0.19
PTPN9-201ENST00000306726 ACVR1BP36896 505 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 EIF4EBP2Q13542 120 aaPredicted RBP13.85□□□□□ -0.19
PTPN9-201ENST00000306726 PLAG1Q6DJT9 500 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 KLBQ86Z14 1044 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 OR4N5Q8IXE1 308 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 ZNF433Q8N7K0 673 aaPredicted RBP13.85□□□□□ -0.19
PTPN9-201ENST00000306726 OR10H4Q8NGA5 316 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.85□□□□□ -0.195e-6■■■■■ 56.5
PTPN9-201ENST00000306726 ASB11Q8WXH4 323 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 PEX13Q92968 403 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 SAP130Q9H0E3 1048 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 MVB12BQ9H7P6 319 aa13.85□□□□□ -0.19
PTPN9-201ENST00000306726 ATF4P18848 351 aaPredicted RBP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 NOS3P29474 1203 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 NTHL1P78549 312 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 ZNF91Q05481 1191 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 TMEM115Q12893 351 aaPredicted RBP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 CNIH2Q6PI25 160 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 SERPINA11Q86U17 422 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 HORMAD2Q8N7B1 307 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 FAM46DQ8NEK8 389 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 PPIL3Q9H2H8 161 aaKnown RBP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 CLDN24A6NM45 220 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 F11P03951 625 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 IDSP22304 550 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 HLA-FP30511 346 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 TIA1P31483 386 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 CD79BP40259 229 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 MINDY2Q8NBR6 621 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 GEMIN6Q8WXD5 167 aaKnown RBP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 USP7Q93009 1102 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 MRPL38Q96DV4 380 aaKnown RBP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 TMEM80Q96HE8 168 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 SERHL2Q9H4I8 314 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 ZNF282Q9UDV7 671 aaPredicted RBP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 GSTK1Q9Y2Q3 226 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 PTPRDP23468 1912 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 GAPDHSO14556 408 aaPredicted RBP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 CSO75390 466 aaKnown RBP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 GYPBP06028 91 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 C8GP07360 202 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 HNRNPFP52597 415 aaKnown RBP13.84□□□□□ -0.19
PTPN9-201ENST00000306726 WNT3P56703 355 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 GPLD1P80108 840 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 FCHO2Q0JRZ9 810 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 POU4F3Q15319 338 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 SEC23BQ15437 767 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 FAM27D1Q5T7N8 215 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 LCN1P1Q5VSP4 162 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 LRRC70Q7Z2Q7 622 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 MSANTD3Q96H12 275 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 TXNDC15Q96J42 360 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 GTF2A1LQ9UNN4 478 aa13.84□□□□□ -0.19
PTPN9-201ENST00000306726 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 ANTXRLA6NF34 631 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 K7ESM1 405 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 SLC30A4O14863 429 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 EEF1E1O43324 174 aaKnown RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 PAHP00439 452 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 EPHX1P07099 455 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 YES1P07947 543 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 CHRNB1P11230 501 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF763Q0D2J5 394 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 FGFBP1Q14512 234 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 TEAD4Q15561 434 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 TBCEQ15813 527 aaPredicted RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 SSX1Q16384 188 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 PLPP4Q5VZY2 271 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 C22orf39Q6P5X5 142 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 CHMP1BQ7LBR1 199 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 GALNT7Q86SF2 657 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 KCTD7Q96MP8 289 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 OR4K3Q96R72 315 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 SLC12A9Q9BXP2 914 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 REEP4Q9H6H4 257 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 MOV10Q9HCE1 1003 aaKnown RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 CCDC177Q9NQR7 707 aaPredicted RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 INSL5Q9Y5Q6 135 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 PRKYO43930 277 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 VNN2O95498 520 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 DCDC1P59894 354 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 NDUFA5Q16718 116 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 LILRA6Q6PI73 481 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 CHST9Q7L1S5 443 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 DGLUCYQ7Z3D6 616 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 TECPR1Q7Z6L1 1165 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 NOXA1Q86UR1 476 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 CYB561A3Q8NBI2 242 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 KREMEN2Q8NCW0 462 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms