RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 FAM47EQ6ZV65 393 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 TAGAPQ8N103 731 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 RIBC1Q8N443 379 aaPredicted RBP24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 OR7G1Q8NGA0 311 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 SPACA9Q96E40 222 aaPredicted RBP24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 MID2Q9UJV3 735 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 TIMM22Q9Y584 194 aa24.42■■□□□ 1.5
CDKN2A-201ENST00000304494 C2orf92A0A1B0GVN3 265 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 SERTM1A2A2V5 107 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 PCDH7O60245 1069 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 CDC40O60508 579 aaKnown RBP eCLIP24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 ERAL1O75616 437 aaKnown RBP24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 CPA3P15088 417 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 CHN1P15882 459 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 CSNK2A2P19784 350 aaPredicted RBP24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 HTR6P50406 440 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 NAGLUP54802 743 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 PPIAP62937 165 aaKnown RBP24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 ACSM2AQ08AH3 577 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 HLA-DQA1Q5Y7H0 255 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 ACSM2BQ68CK6 577 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 PAOXQ6QHF9 649 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 FRMD7Q6ZUT3 714 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 SLC22A16Q86VW1 577 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 TP53INP1Q96A56 240 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 KLHL29Q96CT2 875 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 KCNA7Q96RP8 456 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 OR10A5Q9H207 317 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 ZNF780BQ9Y6R6 833 aa24.41■■□□□ 1.5
CDKN2A-201ENST00000304494 CROCCQ5TZA2 2017 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 GNG14A0A1W2PPG7 69 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 TLDC2A0PJX2 215 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 PINLYPA6NC86 204 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 G3V3Y1 287 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 UBFD1O14562 309 aaKnown RBP24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 ATP1B1P05026 303 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 NUDT17P0C025 328 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 FBXO45P0C2W1 286 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 CCL3P10147 92 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 ALDH9A1P49189 494 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 SLC22A10Q63ZE4 541 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 LYPD8Q6UX82 237 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 CHERPQ8IWX8 916 aaKnown RBP24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 EID3Q8N140 333 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 C4orf33Q8N1A6 199 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 ZNF808Q8N4W9 903 aaPredicted RBP24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 PAQR8Q8TEZ7 354 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 ITLN2Q8WWU7 325 aaPredicted RBP24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 TTTY12Q9BZ98 90 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 IQCGQ9H095 443 aaKnown RBP24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 IL1RL2Q9HB29 575 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 OXSMQ9NWU1 459 aa24.4■■□□□ 1.5
CDKN2A-201ENST00000304494 A0A0G2JMM0 328 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 A0A1B0GTH9 108 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 A0A1W2PPB8 328 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 A0A1W2PRS3 328 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 KIR3DP1A8MWS1 328 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 CAPN14A8MX76 684 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 CRCPO75575 148 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 CT62P0C5K7 136 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 COL8A1P27658 744 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 PTGS2P35354 604 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 FEN1P39748 380 aaKnown RBP24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 HMGCS1Q01581 520 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 SLC18A2Q05940 514 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 LIPMQ5VYY2 423 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 ARHGAP11AQ6P4F7 1023 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 MRGPRGQ86SM5 289 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 MMP21Q8N119 569 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 VWA5B2Q8N398 1253 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 ZNF615Q8N8J6 731 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 ZNF441Q8N8Z8 693 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 OR52N2Q8NGI0 321 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 SH2D2AQ9NP31 389 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 PLSCR2Q9NRY7 297 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 CNIH4Q9P003 139 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 MEMO1Q9Y316 297 aa24.39■■□□□ 1.49
CDKN2A-201ENST00000304494 FAM166BA8MTA8 275 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 GLSO94925 669 aaPredicted RBP24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 SLU7O95391 586 aaKnown RBP24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 DRD2P14416 443 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 GSTM5P46439 218 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 SMSP52788 366 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 IFFO1Q0D2I5 559 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 MAP4K2Q12851 820 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 HEPACAMQ14CZ8 416 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 WDR93Q6P2C0 686 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 GALNT18Q6P9A2 607 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 EMBQ6PCB8 327 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 FGD2Q7Z6J4 655 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 DOLPP1Q86YN1 238 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 FAM13CQ8NE31 585 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 C17orf47Q8NEP4 570 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 OR2W6PQ8NHA6 318 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 APIPQ96GX9 242 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 BRINP2Q9C0B6 783 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 ZDHHC11Q9H8X9 412 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 MKS1Q9NXB0 559 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 UTS2RQ9UKP6 389 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 CFL2Q9Y281 166 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms