RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 KPNA5O15131 536 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 GJB5O95377 273 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 RRASP10301 218 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 FGF9P31371 208 aaPredicted RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 GABRA5P31644 462 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 HNF1BP35680 557 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 HNMTP50135 292 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 DBPQ10586 325 aaPredicted RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 C3orf38Q5JPI3 329 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 CLLU1Q5K131 121 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 USP45Q70EL2 814 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 GPAT4Q86UL3 456 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 OXR1Q8N573 874 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 LRRC17Q8N6Y2 441 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 GPR26Q8NDV2 337 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 GPR32P1Q8NGA4 272 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 CEP76Q8TAP6 659 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 HSD17B8Q92506 261 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 UFD1Q92890 307 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 SCMH1Q96GD3 660 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF582Q96NG8 517 aaPredicted RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 SEPT5Q99719 369 aaPredicted RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 KCMF1Q9P0J7 381 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 PRG3Q9Y2Y8 225 aaPredicted RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 NR2F6P10588 404 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 ELK1P19419 428 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 IL32P24001 234 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 NSG1P42857 185 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 LSM11P83369 360 aaKnown RBP eCLIP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 CSTF1Q05048 431 aaKnown RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 BCL2L1Q07817 233 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 MBTPS1Q14703 1052 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 PRSS53Q2L4Q9 553 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF630Q2M218 657 aaPredicted RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 COL28A1Q2UY09 1125 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 LGALSLQ3ZCW2 172 aaPredicted RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 LIPJQ5W064 366 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 TCTN3Q6NUS6 607 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 ARIH2OSQ8N7S6 290 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 ZBTB44Q8NCP5 570 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 FGF11Q92914 225 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 MS4A3Q96HJ5 214 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 HDHD2Q9H0R4 259 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 RANBP3Q9H6Z4 567 aaPredicted RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 GPBP1L1Q9HC44 474 aaPredicted RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 EMC7Q9NPA0 242 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 NUDT15Q9NV35 164 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 MRPL39Q9NYK5 338 aaKnown RBP10.32□□□□□ -0.76
ZNF558-201ENST00000301475 GSTK1Q9Y2Q3 226 aa10.32□□□□□ -0.76
ZNF558-201ENST00000301475 A0A0U1RQF3 1178 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 A0A1B0GVM2 712 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 MANSC4A6NHS7 340 aaPredicted RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 C8GP07360 202 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ZDHHC11BP0C7U3 371 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 STOMP27105 288 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 CTGFP29279 349 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 TIA1P31483 386 aaKnown RBP eCLIP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 SPAM1P38567 509 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF81P51508 661 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 MAP2K6P52564 334 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 PURAQ00577 322 aaKnown RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 DCST1Q5T197 706 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ACSM5Q6NUN0 579 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 TMEM81Q6P7N7 255 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 SERPINA13PQ6UXR4 307 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 RFLNAQ6ZTI6 216 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 TPGS1Q6ZTW0 290 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ADGRF3Q8IZF5 1079 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 FAM26EQ8N5C1 309 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 OR4D11Q8NGI4 311 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 WBP2Q969T9 261 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 WBP1Q96G27 269 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 UROC1Q96N76 676 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 TMED9Q9BVK6 235 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 PRR14Q9BWN1 585 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 POLDIP3Q9BY77 421 aaKnown RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 MRPL9Q9BYD2 267 aaKnown RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 NT5DC2Q9H857 520 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 CUEDC1Q9NWM3 386 aaPredicted RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 MGAT4BQ9UQ53 548 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 C2orf92A0A1B0GVN3 265 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 TMEM129A0AVI4 362 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 PRR23AA6NEV1 266 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 H3BUI4 141 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 SMAD6O43541 496 aaKnown RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 LZTS3O60299 673 aaPredicted RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 IFNA14P01570 189 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 LIMS3P0CW19 117 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 LIMS4P0CW20 117 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ANXA3P12429 323 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 SOAT1P35610 550 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 CHI3L1P36222 383 aaPredicted RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 SLC11A2P49281 568 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ATP12AP54707 1039 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 RPS26P62854 115 aaKnown RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ADAM15Q13444 863 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ATP13A5Q4VNC0 1218 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 BICRALQ6AI39 1079 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 FAM180BQ6P0A1 224 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms