RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 NDUFAF4Q9P032 175 aa9.59□□□□□ -0.87
FOXN4-201ENST00000299162 WBP11Q9Y2W2 641 aaKnown RBP9.59□□□□□ -0.87
FOXN4-201ENST00000299162 CACNA1IQ9P0X4 2223 aa9.59□□□□□ -0.87
FOXN4-201ENST00000299162 LINC01387J3KSC0 135 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SLC28A2O43868 658 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 PCDHGA12O60330 932 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 HOXB9P17482 250 aaPredicted RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 DLX2Q07687 328 aaPredicted RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 AGBL4Q5VU57 503 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 FAM46CQ5VWP2 391 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ERICH5Q6P6B1 374 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 TRIM40Q6P9F5 258 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SLC9B2Q86UD5 537 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ZNF761Q86XN6 746 aaPredicted RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 HORMAD2Q8N7B1 307 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 PHF10Q8WUB8 498 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 PCNPQ8WW12 178 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 TSACCQ96A04 125 aaPredicted RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 RNF31Q96EP0 1072 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 FYTTD1Q96QD9 318 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 MMP28Q9H239 520 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 C8orf4Q9NR00 106 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 IMPAD1Q9NX62 359 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ATPIF1Q9UII2 106 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 A0A0B4J203 849 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 POM121BA6NF01 834 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ATP6V1G2-DDX39BF2Z307 99 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 NDUFS4O43181 175 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ZW10O43264 779 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 FRS3O43559 492 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 C7P10643 843 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 PRPH2P23942 346 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 GADD45AP24522 165 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 PTX3P26022 381 aaPredicted RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 KRT20P35900 424 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 EIF2DP41214 584 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 HTR2BP41595 481 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 RFX3P48380 749 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 DEFA1P59665 94 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 DEFA3P59666 94 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 DBPQ10586 325 aaPredicted RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 FIP1L1Q6UN15 594 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 CCDC71Q8IV32 467 aaPredicted RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 TMEFF1Q8IYR6 380 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 CCDC116Q8IYX3 515 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 CHCHD4Q8N4Q1 142 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SVOPQ8N4V2 548 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ZCCHC10Q8TBK6 192 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 COL21A1Q96P44 957 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 APOL4Q9BPW4 351 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 MAGIXQ9H6Y5 334 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SFXN1Q9H9B4 322 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SLC28A3Q9HAS3 691 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SPHK1Q9NYA1 384 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ZFR2Q9UPR6 939 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SNRNP200O75643 2136 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 LRRK1Q38SD2 2015 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SEC16AO15027 2179 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ARPC4-TTLL3A0A0A6YYG9 625 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 A0A1W2PQ72 361 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 PRAMEF25A6NGN4 478 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ZNF860A6NHJ4 632 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 H3BN98 237 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 RGS10O43665 173 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 GPR37L1O60883 481 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 OR12D1P0DN82 309 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 CCR8P51685 355 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SELENOWP63302 87 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ID2Q02363 134 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 MXD1Q05195 221 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 BCL7AQ4VC05 210 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 IFI44LQ53G44 452 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 KHDRBS2Q5VWX1 349 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 GDPD3Q7L5L3 318 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 NRARPQ7Z6K4 114 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SHISA5Q8N114 240 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 PGBD3Q8N328 593 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 DNAJB8Q8NHS0 232 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 DACT3Q96B18 629 aaPredicted RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 METTL2AQ96IZ6 378 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 ZNF514Q96K75 400 aaPredicted RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SMAD5Q99717 465 aaKnown RBP9.58□□□□□ -0.88
FOXN4-201ENST00000299162 C19orf43Q9BQ61 176 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 WFDC6Q9BQY6 131 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 SP140LQ9H930 580 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 WASH6PQ9NQA3 447 aa9.58□□□□□ -0.88
FOXN4-201ENST00000299162 B8ZZF3 427 aa9.57□□□□□ -0.88
FOXN4-201ENST00000299162 RNASET2O00584 256 aaKnown RBP9.57□□□□□ -0.88
FOXN4-201ENST00000299162 PRMT3O60678 531 aa9.57□□□□□ -0.88
FOXN4-201ENST00000299162 APOL3O95236 402 aa9.57□□□□□ -0.88
FOXN4-201ENST00000299162 MED26O95402 600 aa9.57□□□□□ -0.88
FOXN4-201ENST00000299162 HPRP00739 348 aa9.57□□□□□ -0.88
FOXN4-201ENST00000299162 LSM11P83369 360 aaKnown RBP eCLIP9.57□□□□□ -0.88
FOXN4-201ENST00000299162 LASP1Q14847 261 aaKnown RBP9.57□□□□□ -0.88
FOXN4-201ENST00000299162 EIF4HQ15056 248 aaKnown RBP9.57□□□□□ -0.88
FOXN4-201ENST00000299162 MLF2Q15773 248 aaPredicted RBP9.57□□□□□ -0.88
FOXN4-201ENST00000299162 SYPL1Q16563 259 aa9.57□□□□□ -0.88
FOXN4-201ENST00000299162 KIAA1614Q5VZ46 1190 aa9.57□□□□□ -0.88
FOXN4-201ENST00000299162 FAM71E1Q6IPT2 247 aa9.57□□□□□ -0.88
FOXN4-201ENST00000299162 ENPP7Q6UWV6 458 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms