RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SETD9Q8NE22 299 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 NUP43Q8NFH3 380 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 OR4K14Q8NGD5 310 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 OR52J3Q8NH60 311 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 RASSF5Q8WWW0 418 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 NMD3Q96D46 503 aaKnown RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 FEVQ99581 238 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 TREX2Q9BQ50 279 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 NPLQ9BXD5 320 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 BCL2L10Q9HD36 194 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 MS4A12Q9NXJ0 267 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 FBXL21Q9UKT6 434 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 NDRG4Q9ULP0 352 aaKnown RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 DAPP1Q9UN19 280 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 MRPS2Q9Y399 296 aaKnown RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 GMPPBQ9Y5P6 360 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 GPC6Q9Y625 555 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 SLC22A7Q9Y694 548 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 HSPE1-MOB4S4R3N1 261 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 CCDC160A6NGH7 325 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 A8MVJ9 347 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 PCDH17O14917 1159 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 GADD45GO95257 159 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 AGXTP21549 392 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 EEF1B2P24534 225 aaKnown RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 TLX1P31314 330 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 LIMS1P48059 325 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 PPP1CAP62136 330 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 RACK1P63244 317 aaKnown RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 PRR5P85299 388 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 IL5RAQ01344 420 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 LASP1Q14847 261 aaKnown RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ELOCQ15369 112 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 EXOC3L2Q2M3D2 409 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF773Q6PK81 442 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 KCTD8Q6ZWB6 473 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 IQCHQ86VS3 1027 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 TSPYL5Q86VY4 417 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 SAMD14Q8IZD0 417 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ARL14Q8N4G2 192 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 SLC5A8Q8N695 610 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF655Q8N720 491 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 OR10G2Q8NGC3 310 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 OR9A2Q8NGT5 310 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 PROX1Q92786 737 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 KAT2AQ92830 837 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF354BQ96LW1 612 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 COL21A1Q96P44 957 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 CDX2Q99626 313 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 SEMA6CQ9H3T2 930 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 LYRM4Q9HD34 91 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 PRDM9Q9NQV7 894 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 NTMQ9P121 344 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 POMT2Q9UKY4 750 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 COMMD3-BMI1R4GMX3 469 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 A0A0G2JPF8 293 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 HNRNPCL2B2RXH8 293 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 HNRNPCL3B7ZW38 293 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 FFAR1O14842 300 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 HNRNPCL4P0DMR1 293 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 CYP4B1P13584 511 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 ETS2P15036 469 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 NME1P15531 152 aaKnown RBP9.02□□□□□ -0.97
TRIM55-201ENST00000276573 ST6GAL1P15907 406 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 JUNBP17275 347 aaPredicted RBP9.02□□□□□ -0.97
TRIM55-201ENST00000276573 FUT4P22083 530 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 EPHA2P29317 976 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 PPP2R1BP30154 601 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 MC3RP41968 323 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 CRISP3P54108 245 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 MAZP56270 477 aaKnown RBP9.02□□□□□ -0.97
TRIM55-201ENST00000276573 RPP38P78345 283 aaKnown RBP9.02□□□□□ -0.97
TRIM55-201ENST00000276573 SIM1P81133 766 aaPredicted RBP9.02□□□□□ -0.97
TRIM55-201ENST00000276573 GNA13Q14344 377 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 LTB4RQ15722 352 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 BROXQ5VW32 411 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 USP53Q70EK8 1073 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 GPR141Q7Z602 305 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 GKN2Q86XP6 184 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 KRT73Q86Y46 540 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 TMEFF1Q8IYR6 380 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 LGI4Q8N135 537 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 SPEM1Q8N4L4 309 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 CAMKK1Q8N5S9 505 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 BBS10Q8TAM1 723 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 OTUB1Q96FW1 271 aaPredicted RBP9.02□□□□□ -0.97
TRIM55-201ENST00000276573 OR7D2Q96RA2 312 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 CSF3RQ99062 836 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 PITX2Q99697 317 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 APOL4Q9BPW4 351 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 PSD2Q9BQI7 771 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 GABARAPL3Q9BY60 117 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 POLR1BQ9H9Y6 1135 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 FAM60AQ9NP50 221 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 TMEM74BQ9NUR3 256 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 RLIMQ9NVW2 624 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 SEC14L3Q9UDX4 400 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 KCNE3Q9Y6H6 103 aa9.02□□□□□ -0.97
TRIM55-201ENST00000276573 SCN3AQ9NY46 2000 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms