RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 C1GALT1C1LP0DN25 315 aa17.21■□□□□ 0.34
COL5A3-201ENST00000264828 CEACAM7Q14002 265 aa17.21■□□□□ 0.34
COL5A3-201ENST00000264828 LY6G5CQ5SRR4 150 aa17.21■□□□□ 0.34
COL5A3-201ENST00000264828 GPR157Q5UAW9 335 aa17.21■□□□□ 0.34
COL5A3-201ENST00000264828 FAM46AQ96IP4 442 aaKnown RBP17.21■□□□□ 0.34
COL5A3-201ENST00000264828 NEDD4LQ96PU5 975 aa17.21■□□□□ 0.34
COL5A3-201ENST00000264828 ABCG5Q9H222 651 aa17.21■□□□□ 0.34
COL5A3-201ENST00000264828 CHD2O14647 1828 aaKnown RBP17.2■□□□□ 0.34
COL5A3-201ENST00000264828 MOGSQ13724 837 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 ATAD3CQ5T2N8 411 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 MYEF2Q9P2K5 600 aaKnown RBP17.2■□□□□ 0.34
COL5A3-201ENST00000264828 OR6C74A6NCV1 312 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 DPP6P42658 865 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 SPHARQ15513 63 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 EOGTQ5NDL2 527 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 C16orf58Q96GQ5 468 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 C19orf25Q9UFG5 118 aaPredicted RBP17.2■□□□□ 0.34
COL5A3-201ENST00000264828 GALTP07902 379 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 ZNF35P13682 527 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 LEPRP48357 1165 aaKnown RBP17.2■□□□□ 0.34
COL5A3-201ENST00000264828 PGAM5Q96HS1 289 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 SGIP1Q9BQI5 828 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 KATNBL1Q9H079 304 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 PER3P56645 1201 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 ACTC1P68032 377 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 ACTA1P68133 377 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 MFSD13AQ14CX5 517 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 ASPGQ86U10 573 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 FNDC8Q8TC99 324 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 F2RL3Q96RI0 385 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 G6PC3Q9BUM1 346 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 AIG1Q9NVV5 245 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 GPR52Q9Y2T5 361 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 TBPL1P62380 186 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 LRIF1Q5T3J3 769 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 KCTD18Q6PI47 426 aaPredicted RBP17.2■□□□□ 0.34
COL5A3-201ENST00000264828 ZDHHC14Q8IZN3 488 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 C7orf50Q9BRJ6 194 aaKnown RBP17.2■□□□□ 0.34
COL5A3-201ENST00000264828 SLC7A11Q9UPY5 501 aa17.2■□□□□ 0.34
COL5A3-201ENST00000264828 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 SLC1A7O00341 560 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 COCHO43405 550 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 MITFO75030 526 aaPredicted RBP17.19■□□□□ 0.34
COL5A3-201ENST00000264828 SNAPC5O75971 98 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 ADORA3P0DMS8 318 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 KCNE1P15382 129 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 OR4D1Q15615 310 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 KANK2Q63ZY3 851 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 DNAAF1Q8NEP3 725 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 C7orf43Q8WVR3 580 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 THRSPQ92748 146 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 IL20RAQ9UHF4 553 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 HMX3A6NHT5 357 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 GJB5O95377 273 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 TNFRSF1BP20333 461 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 SNTB2Q13425 540 aaKnown RBP17.19■□□□□ 0.34
COL5A3-201ENST00000264828 UBQLNLQ8IYU4 475 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 BOLLQ8N9W6 283 aaKnown RBP17.19■□□□□ 0.34
COL5A3-201ENST00000264828 TMEM125Q96AQ2 219 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 OR1F2PQ96R84 312 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 INSL6Q9Y581 213 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 DOT1LQ8TEK3 1739 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 SLC35E2BP0CK96 405 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 CTBP2P56545 445 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 TUBB3Q13509 450 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 APOFQ13790 326 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 C10orf62Q5T681 223 aaPredicted RBP17.19■□□□□ 0.34
COL5A3-201ENST00000264828 PTCHD1Q96NR3 888 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 NELFAQ9H3P2 528 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 ANHXE9PGG2 379 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 CFL1P23528 166 aaKnown RBP17.19■□□□□ 0.34
COL5A3-201ENST00000264828 LUMP51884 338 aaPredicted RBP17.19■□□□□ 0.34
COL5A3-201ENST00000264828 FCRLBQ6BAA4 426 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 FAM180BQ6P0A1 224 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 FIGNL1Q6PIW4 674 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 SLC15A4Q8N697 577 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 OR52E2Q8NGJ4 325 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 ABHD5Q8WTS1 349 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 SETD7Q8WTS6 366 aaKnown RBP17.19■□□□□ 0.34
COL5A3-201ENST00000264828 SLC45A3Q96JT2 553 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 SSX3Q99909 188 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 COPZ2Q9P299 210 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 PHRF1Q9P1Y6 1649 aaKnown RBP17.19■□□□□ 0.34
COL5A3-201ENST00000264828 EMC8O43402 210 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 CREBL2O60519 120 aaPredicted RBP17.19■□□□□ 0.34
COL5A3-201ENST00000264828 CHMP24386 653 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 BMXP51813 675 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 IQCF1Q8N6M8 205 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 OR5B12Q96R08 314 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 OR4K3Q96R72 315 aa17.19■□□□□ 0.34
COL5A3-201ENST00000264828 RFPL2O75678 378 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 KDELR2P33947 212 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 PSAPL1Q6NUJ1 521 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 CNN2Q99439 309 aaKnown RBP17.18■□□□□ 0.34
COL5A3-201ENST00000264828 MARCH4Q9P2E8 410 aaPredicted RBP17.18■□□□□ 0.34
COL5A3-201ENST00000264828 NLKQ9UBE8 527 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 C2orf74A8MZ97 194 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 SYNGR4O95473 234 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 CAPN3P20807 821 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms