RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 SLC35C2Q9NQQ7 365 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 PCDHGA3Q9Y5H0 932 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 CELSR3Q9NYQ7 3312 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 TRMUO75648 421 aaKnown RBP25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 C1QCP02747 245 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 ESRRAP11474 423 aaPredicted RBP25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 SLC5A2P31639 672 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 CDKN2CP42773 168 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 SRSF11Q05519 484 aaKnown RBP25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 TMEM164Q5U3C3 297 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 ZNF551Q7Z340 670 aaPredicted RBP25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 CAMKMTQ7Z624 323 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 STT3BQ8TCJ2 826 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 EFHD2Q96C19 240 aaPredicted RBP25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 MTERF3Q96E29 417 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 SPRY4Q9C004 299 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 SLC6A13Q9NSD5 602 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 MAP10Q9P2G4 905 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 NDUFAF1Q9Y375 327 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 SPTBN4Q9H254 2564 aa25.8■■□□□ 1.72
SMARCD3-201ENST00000262188 ANGPT2O15123 496 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 CIB2O75838 187 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 DLGAP3O95886 979 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 GSNP06396 782 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 ABCB1P08183 1280 aaPredicted RBP25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 PPP2R1BP30154 601 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 CAMK2BQ13554 666 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 MMEL1Q495T6 779 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 CCDC116Q8IYX3 515 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 SLC46A1Q96NT5 459 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 ZPBPQ9BS86 351 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 SERHLQ9NQF3 203 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 PRTFDC1Q9NRG1 225 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 MRGBPQ9NV56 204 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 EHD3Q9NZN3 535 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 ZNF282Q9UDV7 671 aaPredicted RBP25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 KLK13Q9UKR3 277 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 PCDHGA8Q9Y5G5 932 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 CLDN16Q9Y5I7 305 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 FREM2Q5SZK8 3169 aa25.79■■□□□ 1.72
SMARCD3-201ENST00000262188 PDPK1O15530 556 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 CPSF4O95639 269 aaKnown RBP25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 C6orf47O95873 294 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 KLK3P07288 261 aaPredicted RBP25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 SDHBP21912 280 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 MAPRE2Q15555 327 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 ZNF362Q5T0B9 420 aaPredicted RBP25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 FAM198BQ6UWH4 519 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 CLEC4FQ8N1N0 589 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 STARD8Q92502 1023 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 TSLPQ969D9 159 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 SLC39A3Q9BRY0 314 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 TRIM8Q9BZR9 551 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 BHLHE41Q9C0J9 482 aaPredicted RBP25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 NECTIN3Q9NQS3 549 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 CFLARO15519 480 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 CLPTM1O96005 669 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 AGXTP21549 392 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 XKP51811 444 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 MAPKAPK3Q16644 382 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 GTDC1Q4AE62 458 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 C6orf10Q5SRN2 563 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 FAAH2Q6GMR7 532 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 OVCH1Q7RTY7 1134 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 OR4K14Q8NGD5 310 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 GTF2H4Q92759 462 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 PPWD1Q96BP3 646 aaKnown RBP25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 ZNF681Q96N22 645 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 CLK4Q9HAZ1 481 aaKnown RBP25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 MKKSQ9NPJ1 570 aaPredicted RBP25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 MKL2Q9ULH7 1088 aa25.78■■□□□ 1.72
SMARCD3-201ENST00000262188 MRASO14807 208 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 PEX1O43933 1283 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 ZGLP1P0C6A0 271 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 SMIM18P0DKX4 95 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 PRDX6P30041 224 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 RPL3P39023 403 aaKnown RBP25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 PLA2G5P39877 138 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 HSPB3Q12988 150 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 LTB4RQ15722 352 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 NKG7Q16617 165 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 DPY19L1Q2PZI1 675 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 UGT2A3Q6UWM9 527 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 C6orf15Q6UXA7 325 aaPredicted RBP25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 AMER2Q8N7J2 671 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 SUN3Q8TAQ9 357 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 LRFN5Q96NI6 719 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 BBS4Q96RK4 519 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 SH3GL1Q99961 368 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 GLIPR2Q9H4G4 154 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 ATAD3AQ9NVI7 634 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 TAS2R7Q9NYW3 318 aa25.77■■□□□ 1.72
SMARCD3-201ENST00000262188 MAGEB3O15480 346 aa25.76■■□□□ 1.72
SMARCD3-201ENST00000262188 TBX19O60806 448 aa25.76■■□□□ 1.72
SMARCD3-201ENST00000262188 NUDT2P50583 147 aa25.76■■□□□ 1.72
SMARCD3-201ENST00000262188 PCBP4P57723 403 aaKnown RBP25.76■■□□□ 1.72
SMARCD3-201ENST00000262188 ZNF595Q8IYB9 648 aa25.76■■□□□ 1.72
SMARCD3-201ENST00000262188 ADCY4Q8NFM4 1077 aa25.76■■□□□ 1.72
SMARCD3-201ENST00000262188 TANKQ92844 425 aa25.76■■□□□ 1.72
SMARCD3-201ENST00000262188 VN1R1Q9GZP7 353 aa25.76■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms