RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ADA2Q9NZK5 511 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 IFT80Q9P2H3 777 aaPredicted RBP12.48□□□□□ -0.41
SGCA-201ENST00000262018 PACSIN3Q9UKS6 424 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 DOCK10Q96BY6 2186 aa12.48□□□□□ -0.41
SGCA-201ENST00000262018 HEATR5BQ9P2D3 2071 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 CACNA1CQ13936 2221 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 CNOT3O75175 753 aaKnown RBP12.47□□□□□ -0.41
SGCA-201ENST00000262018 CCNDBP1O95273 360 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 FKBP9O95302 570 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 PGRP06401 933 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 UMODP07911 640 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 CD63P08962 238 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 UGT2B7P16662 529 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 SLC6A2P23975 617 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 PTX3P26022 381 aaPredicted RBP12.47□□□□□ -0.41
SGCA-201ENST00000262018 PEBP1P30086 187 aaKnown RBP12.47□□□□□ -0.41
SGCA-201ENST00000262018 TIA1P31483 386 aaKnown RBP eCLIP12.47□□□□□ -0.41
SGCA-201ENST00000262018 SLC7A2P52569 658 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 DGKQP52824 942 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 CASP6P55212 293 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 CSNK1G2P78368 415 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 SRSF11Q05519 484 aaKnown RBP12.47□□□□□ -0.41
SGCA-201ENST00000262018 PWP1Q13610 501 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 CCNIQ14094 377 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 SLC5A12Q1EHB4 618 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.47□□□□□ -0.41
SGCA-201ENST00000262018 FAM174BQ3ZCQ3 159 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 SPANXN4Q5MJ08 99 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 SLC2A7Q6PXP3 512 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 DLEU7Q6UYE1 221 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 MSANTD1Q6ZTZ1 278 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 DHDDSQ86SQ9 333 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 C1orf52Q8N6N3 182 aaKnown RBP12.47□□□□□ -0.41
SGCA-201ENST00000262018 CLHC1Q8NHS4 586 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 NUDT8Q8WV74 236 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 TSSK3Q96PN8 268 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 OR2A14Q96R47 310 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 SLC39A3Q9BRY0 314 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 NDC1Q9BTX1 674 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 IL1RL2Q9HB29 575 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 C1GALT1Q9NS00 363 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 NKX1-2Q9UD57 310 aaPredicted RBP12.47□□□□□ -0.41
SGCA-201ENST00000262018 SEC14L3Q9UDX4 400 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 MAPRE3Q9UPY8 281 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 PCDHA9Q9Y5H5 950 aa12.47□□□□□ -0.41
SGCA-201ENST00000262018 C15orf38-AP3S2A0A0A6YYH1 394 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 IGKV1-8A0A0C4DH67 115 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 ANKDD1BA6NHY2 528 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 H7BY64 318 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 ACOT8O14734 319 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 MAP3K7O43318 606 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 BCAS2O75934 225 aaPredicted RBP12.46□□□□□ -0.41
SGCA-201ENST00000262018 KRT36O76013 467 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 TGFB1P01137 390 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 HSD17B1P14061 328 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 PRPS1L1P21108 318 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 HRH2P25021 359 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 S100A3P33764 101 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 ASMTP46597 345 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 HNRNPFP52597 415 aaKnown RBP12.46□□□□□ -0.41
SGCA-201ENST00000262018 MS4A2Q01362 244 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 RBPJQ06330 500 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 TRAP1Q12931 704 aaKnown RBP12.46□□□□□ -0.41
SGCA-201ENST00000262018 CAPRIN1Q14444 709 aaKnown RBP12.46□□□□□ -0.41
SGCA-201ENST00000262018 RBBP5Q15291 538 aaKnown RBP12.46□□□□□ -0.41
SGCA-201ENST00000262018 DPY19L1Q2PZI1 675 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 ISLR2Q6UXK2 745 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 ARPINQ7Z6K5 226 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 SLC15A3Q8IY34 581 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 GPR135Q8IZ08 494 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 METTL4Q8N3J2 472 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 ANKRD53Q8N9V6 530 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 CHDHQ8NE62 594 aaPredicted RBP12.46□□□□□ -0.41
SGCA-201ENST00000262018 FLVCR1-AS1Q8TAF5 88 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 GTF2H4Q92759 462 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 TMEM125Q96AQ2 219 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 ASB9Q96DX5 294 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 EGLN2Q96KS0 407 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 PRAP1Q96NZ9 151 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 EBPLQ9BY08 206 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 LHPPQ9H008 270 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 KLHL25Q9H0H3 589 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 MRPS30Q9NP92 439 aaKnown RBP12.46□□□□□ -0.41
SGCA-201ENST00000262018 TMEM184CQ9NVA4 438 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 CMTM6Q9NX76 183 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 C15orf41Q9Y2V0 281 aa12.46□□□□□ -0.41
SGCA-201ENST00000262018 A0A0J9YY10 115 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 TRBC2A0A5B9 178 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 PRORSD1PA6NEY8 169 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 NME4O00746 187 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 PCDH7O60245 1069 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 SEMA3DO95025 777 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 KCNH1O95259 989 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 TBX6O95947 436 aaPredicted RBP12.45□□□□□ -0.42
SGCA-201ENST00000262018 ST6GAL1P15907 406 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 MST1P26927 711 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 CMPK1P30085 196 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 PHC1P78364 1004 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 ARG2P78540 354 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 DCDP81605 110 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms