RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MED26O95402 600 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 ANKRD34CP0C6C1 535 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 ACADSP16219 412 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 ZNF10P21506 573 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-201ENST00000258962 CASP9P55211 416 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 ZNF750Q32MQ0 723 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 OGFRL1Q5TC84 451 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-201ENST00000258962 ERICH5Q6P6B1 374 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 LRRC69Q6ZNQ3 347 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 SNIP1Q8TAD8 396 aaKnown RBP16.42■□□□□ 0.22
SRSF1-201ENST00000258962 SUN3Q8TAQ9 357 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 NCLNQ969V3 563 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 FAM162AQ96A26 154 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 ZNF285Q96NJ3 590 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 DCBLD2Q96PD2 775 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 TAAR9Q96RI9 348 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 CSF3RQ99062 836 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 NLNQ9BYT8 704 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 KLHL4Q9C0H6 718 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 SLC39A1Q9NY26 324 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 SNX8Q9Y5X2 465 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 B4E171 279 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 TLX3O43711 291 aaPredicted RBP16.41■□□□□ 0.22
SRSF1-201ENST00000258962 SRPX2O60687 465 aaPredicted RBP16.41■□□□□ 0.22
SRSF1-201ENST00000258962 ERAL1O75616 437 aaKnown RBP16.41■□□□□ 0.22
SRSF1-201ENST00000258962 ETFAP13804 333 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 IL10P22301 178 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 CPN2P22792 545 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 NTSP30990 170 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 SLC5A2P31639 672 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 CHI3L1P36222 383 aaPredicted RBP16.41■□□□□ 0.22
SRSF1-201ENST00000258962 ETV5P41161 510 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 TSPAN7P41732 249 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 ARL4DP49703 201 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 SEPHS1P49903 392 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 CEBPEQ15744 281 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 LRRC36Q1X8D7 754 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 SAXO2Q658L1 398 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 ANGPTL8Q6UXH0 198 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 PRSS42Q7Z5A4 293 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 RNF130Q86XS8 419 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 ZNF248Q8NDW4 579 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 ZNF681Q96N22 645 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 ASPSCR1Q9BZE9 553 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 B3GNT4Q9C0J1 378 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 CHRNA10Q9GZZ6 450 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 LYRM4Q9HD34 91 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 DCAF13Q9NV06 445 aaKnown RBP16.41■□□□□ 0.22
SRSF1-201ENST00000258962 OCIAD1Q9NX40 245 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 NAALAD2Q9Y3Q0 740 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 EPG5Q9HCE0 2579 aa16.41■□□□□ 0.22
SRSF1-201ENST00000258962 C8orf89P0DMQ9 161 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 ATP6V1C1P21283 382 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 BUD31P41223 144 aaPredicted RBP16.4■□□□□ 0.22
SRSF1-201ENST00000258962 CRATP43155 626 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 NCBP2P52298 156 aaKnown RBP eCLIP16.4■□□□□ 0.225e-25■■□□□ 11.9
SRSF1-201ENST00000258962 FADDQ13158 208 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 NKG7Q16617 165 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 ENPP6Q6UWR7 440 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 OR5T3Q8NGG3 340 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 FBXO30Q8TB52 745 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 MAL2Q969L2 176 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 NEURL3Q96EH8 262 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 BBS4Q96RK4 519 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 SEPHS2Q99611 448 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 ZNF184Q99676 751 aaPredicted RBP16.4■□□□□ 0.22
SRSF1-201ENST00000258962 VCXQ9H320 206 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 ZNF768Q9H5H4 540 aaKnown RBP16.4■□□□□ 0.22
SRSF1-201ENST00000258962 OLAHQ9NV23 265 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 SOHLH2Q9NX45 425 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 PLCL2Q9UPR0 1127 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 MAP4K5Q9Y4K4 846 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 SPTBP11277 2137 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 TXNDC9O14530 226 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 HNRNPRO43390 633 aaKnown RBP16.4■□□□□ 0.22
SRSF1-201ENST00000258962 TPST1O60507 370 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 KRT75O95678 551 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 SERPINA1P01009 418 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 BMP2P12643 396 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 HOXB6P17509 224 aaKnown RBP16.4■□□□□ 0.22
SRSF1-201ENST00000258962 PTGER1P34995 402 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 PCGF2P35227 344 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 FEN1P39748 380 aaKnown RBP16.4■□□□□ 0.22
SRSF1-201ENST00000258962 EIF2S3P41091 472 aaKnown RBP16.4■□□□□ 0.22
SRSF1-201ENST00000258962 RAB15P59190 212 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 MC2RQ01718 297 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 VAC14Q08AM6 782 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 VEZF1Q14119 521 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 GCNT6Q5T4J0 391 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 DCAF12Q5T6F0 453 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 AMIGO2Q86SJ2 522 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 CA13Q8N1Q1 262 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 ZFP28Q8NHY6 868 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 NAF1Q96HR8 494 aaKnown RBP16.4■□□□□ 0.22
SRSF1-201ENST00000258962 SEMA6AQ9H2E6 1030 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 RAD21L1Q9H4I0 556 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 PDE7BQ9NP56 450 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 MS4A12Q9NXJ0 267 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 ENTPD4Q9Y227 616 aa16.4■□□□□ 0.22
SRSF1-201ENST00000258962 SGK494L7N484 410 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms