RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 GGT2P36268 569 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 CDK3Q00526 305 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 FADDQ13158 208 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 SPHARQ15513 63 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 ZSWIM7Q19AV6 140 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 WSCD2Q2TBF2 565 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 ZNF791Q3KP31 576 aaPredicted RBP13.97□□□□□ -0.17
CAB39-201ENST00000258418 PRSS36Q5K4E3 855 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 PAQR6Q6TCH4 344 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 ASB18Q6ZVZ8 466 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 ZNF784Q8NCA9 323 aaPredicted RBP13.97□□□□□ -0.17
CAB39-201ENST00000258418 OR51L1Q8NGJ5 315 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 OR9A2Q8NGT5 310 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 SPPL3Q8TCT6 385 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 DEPDC7Q96QD5 511 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 RACGAP1Q9H0H5 632 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 SLC6A14Q9UN76 642 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 SLC5A10A0PJK1 596 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 A8MUA0 341 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 RNASET2O00584 256 aaKnown RBP13.97□□□□□ -0.17
CAB39-201ENST00000258418 JRKO75564 520 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 HOXB2P14652 356 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 WNT3P56703 355 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 GABARAPL2P60520 117 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 MRPL28Q13084 256 aaKnown RBP13.97□□□□□ -0.17
CAB39-201ENST00000258418 C18orf63Q68DL7 685 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 KDM4DQ6B0I6 523 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 ARL9Q6T311 187 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 Q6ZNX1 250 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 GALNT12Q8IXK2 581 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 OR5P2Q8WZ92 322 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 PCDHGA6Q9Y5G7 932 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 CCRL2O00421 344 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 PLPP1O14494 284 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 SLC15A1P46059 708 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 RUNX3Q13761 415 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 LTB4RQ15722 352 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 CCBE1Q6UXH8 406 aaPredicted RBP13.97□□□□□ -0.17
CAB39-201ENST00000258418 NCCRP1Q6ZVX7 275 aaPredicted RBP13.97□□□□□ -0.17
CAB39-201ENST00000258418 COX18Q8N8Q8 333 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 GATSQ8NAP1 163 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 FCGR1BQ92637 280 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 MCHR1Q99705 422 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 NEUROD4Q9HD90 331 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 CDH7Q9ULB5 785 aa13.97□□□□□ -0.17
CAB39-201ENST00000258418 RPL36Q9Y3U8 105 aaKnown RBP13.97□□□□□ -0.17
CAB39-201ENST00000258418 IDH3BO43837 385 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 SOX30O94993 753 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 RHCEP18577 417 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 SLC35A2P78381 396 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 ZNF155Q12901 538 aaPredicted RBP13.96□□□□□ -0.17
CAB39-201ENST00000258418 AMER3Q8N944 861 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 WDR20Q8TBZ3 569 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 CHTF18Q8WVB6 975 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 MAN2B2Q9Y2E5 1009 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 IFT52Q9Y366 437 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 CSNK1G3Q9Y6M4 447 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 EIF3FO00303 357 aaPredicted RBP13.96□□□□□ -0.17
CAB39-201ENST00000258418 CXCL10P02778 98 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 PORP16435 677 aaPredicted RBP13.96□□□□□ -0.17
CAB39-201ENST00000258418 DDX6P26196 483 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■■□□ 19
CAB39-201ENST00000258418 KHKP50053 298 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 CDH11P55287 796 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 KCNJ10P78508 379 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 NANOGNBQ7Z5D8 188 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 MARCH9Q86YJ5 346 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 ANKRD13BQ86YJ7 626 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 PIGXQ8TBF5 258 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 INSM2Q96T92 566 aaPredicted RBP13.96□□□□□ -0.17
CAB39-201ENST00000258418 TREX2Q9BQ50 279 aaPredicted RBP13.96□□□□□ -0.17
CAB39-201ENST00000258418 IFT27Q9BW83 186 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 SLC35C2Q9NQQ7 365 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 WDR45Q9Y484 360 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 PEX16Q9Y5Y5 336 aa13.96□□□□□ -0.17
CAB39-201ENST00000258418 GPC6Q9Y625 555 aaPredicted RBP13.96□□□□□ -0.17
CAB39-201ENST00000258418 HYAL3O43820 417 aaPredicted RBP13.96□□□□□ -0.18
CAB39-201ENST00000258418 B4GALT2O60909 372 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 GGTA1PQ4G0N0 100 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 PRRT3Q5FWE3 981 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 NUP43Q8NFH3 380 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 OR56A3Q8NH54 315 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 ZNF671Q8TAW3 534 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 RIPOR3Q96MK2 946 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 LYSMD1Q96S90 227 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 MAPKAP1Q9BPZ7 522 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 EGLN3Q9H6Z9 239 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 BRF2Q9HAW0 419 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 GMEB1Q9Y692 573 aa13.96□□□□□ -0.18
CAB39-201ENST00000258418 CCDC182A6NF36 153 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 SLC30A4O14863 429 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 PGRMC2O15173 223 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 HTR1AP08908 422 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 GKN3PP0CG01 181 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 ADORA3P0DMS8 318 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 ALAS2P22557 587 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 TALDO1P37837 337 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 CD83Q01151 205 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 SLC3A1Q07837 685 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 NIPAL1Q6NVV3 410 aa13.95□□□□□ -0.18
CAB39-201ENST00000258418 PRR23CQ6ZRP0 262 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms