RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 RNH1P13489 461 aaKnown RBP17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 ATP4BP51164 291 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 ATG9BQ674R7 924 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 FIGLAQ6QHK4 219 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 TMEM135Q86UB9 458 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 SUN5Q8TC36 379 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 HHIPQ96QV1 700 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 LTBP3Q9NS15 1303 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 C10orf71Q711Q0 1435 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 SCAMP2O15127 329 aaKnown RBP17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 NPPAP01160 153 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 DEFB103AP81534 67 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 DEFB133Q30KQ1 61 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 RPLP0P6Q8NHW5 317 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 TESCQ96BS2 214 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 RADILQ96JH8 1075 aa17.83■□□□□ 0.45
SMARCC1-201ENST00000254480 PORP16435 677 aaPredicted RBP17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 POU3F4P49335 361 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 MVB12BQ9H7P6 319 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 PCDHGB2Q9Y5G2 931 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 CDH10Q9Y6N8 788 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 A6NL46 340 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 MITFO75030 526 aaPredicted RBP17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 LRR1Q96L50 414 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 MROQ9BYG7 248 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 YTHDF1Q9BYJ9 559 aaKnown RBP17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 RPH3AQ9Y2J0 694 aaPredicted RBP17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 TOXO94900 526 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 AFF1P51825 1210 aaKnown RBP17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 HSD17B12Q53GQ0 312 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 OR6Q1Q8NGQ2 317 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 OR56A3Q8NH54 315 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 PROKR1Q8TCW9 393 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 FUBP1Q96AE4 644 aaKnown RBP17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 PPP1R14BQ96C90 147 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 ISOC1Q96CN7 298 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 DHDHQ9UQ10 334 aa17.83■□□□□ 0.44
SMARCC1-201ENST00000254480 NUAK1O60285 661 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 OXTRP30559 389 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 MAGEA8P43361 318 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 RPS15AP62244 130 aaKnown RBP17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 WDR53Q7Z5U6 358 aaPredicted RBP17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 LMNTD1Q8N9Z9 388 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 OR13C3Q8NGS6 347 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 NPIPA5A0A0B4J1W7 369 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 hCG_1807616A0A1W2PRN6 198 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 NPIPA7E9PJI5 369 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 NPIPA8P0DM63 369 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 LRRC69Q6ZNQ3 347 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 LAS2Q8IYD9 372 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF100Q8IYN0 542 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 ABHD5Q8WTS1 349 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 DAZLQ92904 295 aaKnown RBP17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 PGAM5Q96HS1 289 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF285Q96NJ3 590 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 MYO10Q9HD67 2058 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 SLC16A5O15375 505 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 OPN1LWP04000 364 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 NR2C1P13056 603 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 CEBPBP17676 345 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 GRIN2CQ14957 1233 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 CDK10Q15131 360 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 C6orf183Q5T699 404 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 LIPIQ6XZB0 460 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 C16orf78Q8WTQ4 265 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF142P52746 1687 aaPredicted RBP17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 FAM208AQ9UK61 1670 aaKnown RBP17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 TRBV2A0A0J9YWF9 115 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 CNMDO75829 334 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 MAPK3P27361 379 aaPredicted RBP17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 CERS1P27544 350 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 HMGCLP35914 325 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 SLC26A5P58743 744 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 KIAA0319Q5VV43 1072 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 C15orf39Q6ZRI6 1047 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 MOAP1Q96BY2 351 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 DISC1C4P0D8 188 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 FAAHO00519 579 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 TMPPEQ6ZT21 453 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 TMEM19Q96HH6 336 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 PITX2Q99697 317 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 HSPB11Q9Y547 144 aa17.82■□□□□ 0.44
SMARCC1-201ENST00000254480 MT-ND2P03891 347 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 BMP1P13497 986 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 CYBAP13498 195 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 PVALBP20472 110 aaPredicted RBP17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 MAGEA2P43356 314 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 FCAMRQ8WWV6 532 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 FAM3CQ92520 227 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 ENY2Q9NPA8 101 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 GPR83Q9NYM4 423 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 PCDHGA6Q9Y5G7 932 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 UNCXA6NJT0 531 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 RPA4Q13156 261 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 RMI1Q9H9A7 625 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF84P51523 738 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 FOXA1P55317 472 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 NDUFAF5Q5TEU4 345 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 COMMD6Q7Z4G1 85 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms