RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ODF4Q2M2E3 257 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 ALKAL2Q6UX46 152 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 TTLQ8NG68 377 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 ELP5Q8TE02 316 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 NTAN1Q96AB6 310 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZDHHC12Q96GR4 267 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZNF382Q96SR6 550 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 NTPCRQ9BSD7 190 aaKnown RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 URM1Q9BTM9 101 aaKnown RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 BOLA1Q9Y3E2 137 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 PCDHA2Q9Y5H9 948 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 MYO9BQ13459 2157 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 TRBV2A0A0J9YWF9 115 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR51F1A6NGY5 319 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 INHAP05111 366 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 DCTP40126 519 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ACTA2P62736 377 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ACTG2P63267 376 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 COTL1Q14019 142 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 C3orf33Q6P1S2 294 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 IGDCC3Q8IVU1 814 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 DCUN1D3Q8IWE4 304 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 GPR152Q8TDT2 470 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 SMAP2Q8WU79 429 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZNF558Q96NG5 402 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 EPYCQ99645 322 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 C17orf62Q9BQA9 187 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 APOBEC3GQ9HC16 384 aaKnown RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 SMCO4Q9NRQ5 59 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 FAM230AA0A1W2PPH8 454 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 A0A1W2PPK0 400 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 A0A1W2PS29 197 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 TBC1D3BA6NDS4 549 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 SDC3O75056 442 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 DCNP07585 359 aaKnown RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 RHCEP18577 417 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 GGT1P19440 569 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 SLBPQ14493 270 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 RNF151Q2KHN1 245 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 FLYWCH1Q4VC44 716 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 TXNRD3NBQ6F5E7 133 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 RPL13AP3Q6NVV1 102 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ENPP7Q6UWV6 458 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZER1Q7Z7L7 766 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZNF546Q86UE3 836 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR13C4Q8NGS5 318 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 GRHL3Q8TE85 626 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 HMCESQ96FZ2 354 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 HRH3Q9Y5N1 445 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 CNTNAP1P78357 1384 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 SPEF2Q9C093 1822 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 A0A0D9SG52 128 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ADAP00813 363 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 RAB4AP20338 218 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 PRSS3P35030 304 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ACVR1BP36896 505 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 RRAS2P62070 204 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 SP2Q02086 613 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 EMX1Q04741 257 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 TCEAL1Q15170 157 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 RFPL4BQ6ZWI9 263 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 CYS1Q717R9 158 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 TRIM46Q7Z4K8 759 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 NLRP8Q86W28 1048 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 RASGRP3Q8IV61 690 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR5T1Q8NG75 326 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 CD99L2Q8TCZ2 262 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 SETD7Q8WTS6 366 aaKnown RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ELP4Q96EB1 424 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 MICU1Q9BPX6 476 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 GSX2Q9BZM3 304 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 TXNRD2Q9NNW7 524 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 PNO1Q9NRX1 252 aaKnown RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 VNN3Q9NY84 501 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZMAT5Q9UDW3 170 aaKnown RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 DLGAP4Q9Y2H0 992 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 A0A087WZY1 265 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 LRRC72A6NJI9 287 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 NME4O00746 187 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 LALBAP00709 142 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 TGFB1P01137 390 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 TRAPPC2P0DI81 140 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 TRAPPC2BP0DI82 140 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 JUNDP17535 347 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 IDSP22304 550 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 CRHBPP24387 322 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 GJA5P36382 358 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 PDX1P52945 283 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 WNT4P56705 351 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZNF648Q5T619 568 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 RPS27LQ71UM5 84 aaKnown RBP12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZFP41Q8N8Y5 198 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR52E4Q8NGH9 312 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR10K1Q8NGX5 313 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 FBXO27Q8NI29 283 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 SLC7A13Q8TCU3 470 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 PSMG2Q969U7 264 aa12.6□□□□□ -0.39
PCDHGA3-201ENST00000253812 SLC25A44Q96H78 314 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms