RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MAPK8P45983 427 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 MAP2K3P46734 347 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 TAS2R41P59536 307 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 PSPHP78330 225 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 MPEG1Q2M385 716 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 MPPE1Q53F39 396 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 CCSAPQ6IQ19 270 aaPredicted RBP11.36□□□□□ -0.59
USHBP1-201ENST00000252597 PODNL1Q6PEZ8 512 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 UNC5DQ6UXZ4 953 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 CCDC32Q9BV29 185 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 XKR8Q9H6D3 395 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 C1GALT1Q9NS00 363 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 EXO1Q9UQ84 846 aaKnown RBP11.36□□□□□ -0.59
USHBP1-201ENST00000252597 CSNK1G3Q9Y6M4 447 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 MAU2Q9Y6X3 613 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 CASP8AP2Q9UKL3 1982 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 TANC1Q9C0D5 1861 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 ANKRD36A6QL64 1941 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 MRPL3P09001 348 aaKnown RBP11.35□□□□□ -0.59
USHBP1-201ENST00000252597 PRKAR1AP10644 381 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 SSTR2P30874 369 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 GPR4P46093 362 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 GALK2Q01415 458 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 BCL2L15Q5TBC7 163 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 FCRLBQ6BAA4 426 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 GRHL2Q6ISB3 625 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 HSDL2Q6YN16 418 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF730Q6ZMV8 503 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 KLBQ86Z14 1044 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 OR7G1Q8NGA0 311 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 GRPEL2Q8TAA5 225 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 ZFPM2Q8WW38 1151 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 C17orf62Q9BQA9 187 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 SRRQ9GZT4 340 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 FBXW2Q9UKT8 454 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 ZFR2Q9UPR6 939 aaKnown RBP11.35□□□□□ -0.59
USHBP1-201ENST00000252597 NTNG1Q9Y2I2 539 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 OR51B4Q9Y5P0 310 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 LOC105369274A0A096LPK9 316 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 TRBV5-4A0A0C4DH59 114 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 ZC3H12DA2A288 527 aaKnown RBP11.35□□□□□ -0.59
USHBP1-201ENST00000252597 DVL2O14641 736 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 GPR37L1O60883 481 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 SOCS5O75159 536 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 SCG5P05408 212 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 IL1RNP18510 177 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 XCR1P46094 333 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF630Q2M218 657 aaPredicted RBP11.35□□□□□ -0.59
USHBP1-201ENST00000252597 SAXO2Q658L1 398 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 TCTN3Q6NUS6 607 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 OR4N4Q8N0Y3 316 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 VWA5B2Q8N398 1253 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 OR51G2Q8NGK0 314 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 NEIL3Q8TAT5 605 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 TEX47Q8TBZ9 253 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 ALG14Q96F25 216 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 CHIAQ9BZP6 476 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 OR51V1Q9H2C8 321 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 SPATA6Q9NWH7 488 aaPredicted RBP11.35□□□□□ -0.59
USHBP1-201ENST00000252597 ING3Q9NXR8 418 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 SPATA2Q9UM82 520 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 V9GYH0 126 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 FURINP09958 794 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 CCT3P49368 545 aaKnown RBP11.35□□□□□ -0.59
USHBP1-201ENST00000252597 FCHO2Q0JRZ9 810 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 EIF4HQ15056 248 aaKnown RBP11.35□□□□□ -0.59
USHBP1-201ENST00000252597 SMUG1Q53HV7 270 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 SLC43A3Q8NBI5 491 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 UXS1Q8NBZ7 420 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 OR5AR1Q8NGP9 310 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 TRIM63Q969Q1 353 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 C11orf24Q96F05 449 aaPredicted RBP11.35□□□□□ -0.59
USHBP1-201ENST00000252597 FAM46AQ96IP4 442 aaKnown RBP11.35□□□□□ -0.59
USHBP1-201ENST00000252597 DHRS1Q96LJ7 313 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 INSL5Q9Y5Q6 135 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 CHD5Q8TDI0 1954 aa11.35□□□□□ -0.59
USHBP1-201ENST00000252597 HMX3A6NHT5 357 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 TMEM229AB2RXF0 380 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 TMEM189-UBE2V1I3L0A0 370 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 ICMTO60725 284 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 NOS1APO75052 506 aaPredicted RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 PPP2R1BP30154 601 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SSR2P43308 183 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 TCTN1Q2MV58 587 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 PLEKHS1Q5SXH7 462 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 ARL9Q6T311 187 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 GAREM2Q75VX8 874 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 CCDC116Q8IYX3 515 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 OR4D11Q8NGI4 311 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 OR8J1Q8NGP2 316 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 UFD1Q92890 307 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 TTLL2Q9BWV7 592 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 CUEDC1Q9NWM3 386 aaPredicted RBP11.34□□□□□ -0.59
USHBP1-201ENST00000252597 EXTL2Q9UBQ6 330 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 SPEF1Q9Y4P9 236 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 TRBV23OR9-2A0A075B6M9 112 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 ZAR1LA6NP61 321 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 HEPACAM2A8MVW5 462 aa11.34□□□□□ -0.59
USHBP1-201ENST00000252597 GFYI3L273 518 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms