RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 SPERTQ8NA61 448 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 DTD2Q96FN9 168 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 MAP6Q96JE9 813 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 COQ10AQ96MF6 247 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 UCK2Q9BZX2 261 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 NDRG2Q9UN36 371 aaKnown RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 GBAP04062 536 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 EPCAMP16422 314 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 NPPBP16860 134 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 NUDT1P36639 197 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 DGKGP49619 791 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 ELOAQ14241 798 aaKnown RBP17.96■□□□□ 0.47
SNX4-201ENST00000251775 NRSN1Q8IZ57 195 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 OTUB2Q96DC9 234 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 ENPP4Q9Y6X5 453 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 LILRB5O75023 590 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 OR2B3O76000 313 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 RECKO95980 971 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 SRPRAP08240 638 aaKnown RBP17.96■□□□□ 0.47
SNX4-201ENST00000251775 IGFBP1P08833 259 aaPredicted RBP17.96■□□□□ 0.47
SNX4-201ENST00000251775 ZNF8P17098 575 aaPredicted RBP17.96■□□□□ 0.47
SNX4-201ENST00000251775 HBA1P69905 142 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 ATP6V1C2Q8NEY4 427 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 PROKR2Q8NFJ6 384 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 POF1BQ8WVV4 589 aa17.96■□□□□ 0.47
SNX4-201ENST00000251775 KIAA1143Q96AT1 154 aaPredicted RBP17.96■□□□□ 0.47
SNX4-201ENST00000251775 ARRDC5A6NEK1 342 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 TRIM3O75382 744 aaPredicted RBP17.95■□□□□ 0.46
SNX4-201ENST00000251775 CEBPBP17676 345 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 MAP2K3P46734 347 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 ZNF91Q05481 1191 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 EEF1A2Q05639 463 aaKnown RBP17.95■□□□□ 0.46
SNX4-201ENST00000251775 TMEM201Q5SNT2 666 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 DDI2Q5TDH0 399 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 LCN1P1Q5VSP4 162 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 C22orf42Q6IC83 251 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 HSDL2Q6YN16 418 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 ZNF767PQ75MW2 155 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 BCDIN3DQ7Z5W3 292 aaKnown RBP17.95■□□□□ 0.46
SNX4-201ENST00000251775 ABI3BPQ7Z7G0 1075 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 OR4K1Q8NGD4 311 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 OR9Q1Q8NGQ5 310 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 OR2AG1Q9H205 316 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 REV1Q9UBZ9 1251 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 SATB2Q9UPW6 733 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 RNASET2O00584 256 aaKnown RBP17.95■□□□□ 0.46
SNX4-201ENST00000251775 KIAA0355O15063 1070 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 MAN2A2P49641 1150 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 RBBP4Q09028 425 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 SLBPQ14493 270 aaKnown RBP eCLIP17.95■□□□□ 0.46
SNX4-201ENST00000251775 CREB3L2Q70SY1 520 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 C1GALT1Q9NS00 363 aa17.95■□□□□ 0.46
SNX4-201ENST00000251775 SMIM30A4D0T7 59 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 SMLR1H3BR10 107 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 MEN1O00255 615 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 SAP18O00422 153 aaKnown RBP17.94■□□□□ 0.46
SNX4-201ENST00000251775 PDE9AO76083 593 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 PSKH1P11801 424 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 M6PRP20645 277 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 MAPK9P45984 424 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 CRB2Q5IJ48 1285 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 FBXO15Q8NCQ5 510 aaPredicted RBP17.94■□□□□ 0.46
SNX4-201ENST00000251775 OR52N2Q8NGI0 321 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.94■□□□□ 0.464e-9■■■■□ 22.7
SNX4-201ENST00000251775 TMEM203Q969S6 136 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 SLC35A5Q9BS91 424 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 SPNS1Q9H2V7 528 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 EPHX3Q9H6B9 360 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 CXXC1Q9P0U4 656 aaPredicted RBP17.94■□□□□ 0.46
SNX4-201ENST00000251775 NDOR1Q9UHB4 597 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 ACSL6Q9UKU0 697 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 INSL6Q9Y581 213 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 TRBV4-1A0A0J9YWV2 114 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 TRBC2A0A5B9 178 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 SOX14O95416 240 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 TGFB1P01137 390 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 FAM157BP0CG42 384 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 IFI30P13284 250 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 RHCEP18577 417 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 APEX1P27695 318 aaKnown RBP17.94■□□□□ 0.46
SNX4-201ENST00000251775 IRS1P35568 1242 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 SLC9A3P48764 834 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 CDK6Q00534 326 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 MC1RQ01726 317 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 MEF2AQ02078 507 aaPredicted RBP17.94■□□□□ 0.46
SNX4-201ENST00000251775 ZNF628Q5EBL2 1059 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 IER5LQ5T953 404 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 COMMD6Q7Z4G1 85 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 BPHLQ86WA6 291 aaPredicted RBP17.94■□□□□ 0.46
SNX4-201ENST00000251775 TRAPPC5Q8IUR0 188 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 NXPE3Q969Y0 559 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 ZC3HAV1LQ96H79 300 aaKnown RBP17.94■□□□□ 0.46
SNX4-201ENST00000251775 NELL2Q99435 816 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 GTPBP2Q9BX10 602 aaKnown RBP17.94■□□□□ 0.46
SNX4-201ENST00000251775 RERGLQ9H628 205 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 TMEM38AQ9H6F2 299 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 ATP6V1HQ9UI12 483 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 TMCC3Q9ULS5 477 aa17.94■□□□□ 0.46
SNX4-201ENST00000251775 FFAR1O14842 300 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 NOS1APO75052 506 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms