RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 OLFM2O95897 454 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 C1GALT1C1LP0DN25 315 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 KCNJ5P48544 419 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 GIPRP48546 466 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 CLDN20P56880 219 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 EFNB1P98172 346 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 ALDH6A1Q02252 535 aaKnown RBP14.7□□□□□ -0.06
DDX55-201ENST00000238146 MZT2BQ6NZ67 158 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 IFNL1Q8IU54 200 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 NPAS4Q8IUM7 802 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 REM2Q8IYK8 340 aaPredicted RBP14.7□□□□□ -0.06
DDX55-201ENST00000238146 FAM109AQ8N4B1 249 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 TMEM163Q8TC26 289 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 NEURL3Q96EH8 262 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 TRIM45Q9H8W5 580 aaPredicted RBP14.7□□□□□ -0.06
DDX55-201ENST00000238146 SLAMF7Q9NQ25 335 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 ING3Q9NXR8 418 aa14.7□□□□□ -0.06
DDX55-201ENST00000238146 EFEMP2O95967 443 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 CTSAP10619 480 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 PRKAR1AP10644 381 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 DDX5P17844 614 aaKnown RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 LSM11P83369 360 aaKnown RBP eCLIP14.69□□□□□ -0.06
DDX55-201ENST00000238146 CRHR2Q13324 411 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 NFE2L1Q14494 772 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 GPNMBQ14956 572 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 WSCD2Q2TBF2 565 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 MPP7Q5T2T1 576 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 PODNL1Q6PEZ8 512 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 ZER1Q7Z7L7 766 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 ZNF740Q8NDX6 193 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 ZNF354BQ96LW1 612 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 MARVELD1Q9BSK0 173 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 GTPBP2Q9BX10 602 aaKnown RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 MKRN2Q9H000 416 aaKnown RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 MCUBQ9NWR8 336 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 STMN3Q9NZ72 180 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 GSTK1Q9Y2Q3 226 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 HTTP42858 3142 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 TMEM129A0AVI4 362 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 MANSC4A6NHS7 340 aaPredicted RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 MMP11P24347 488 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 HLA-FP30511 346 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 UAP1L1Q3KQV9 507 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 KLHL22Q53GT1 634 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 CREB3L2Q70SY1 520 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 CMTM8Q8IZV2 173 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 FOPNLQ96NB1 174 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 GPA33Q99795 319 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 TRAF4Q9BUZ4 470 aaPredicted RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 LSM7Q9UK45 103 aaKnown RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 A4GNTQ9UNA3 340 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 DYRK1BQ9Y463 629 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 ZSCAN5BA6NJL1 495 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 CASKO14936 926 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 ATG13O75143 517 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 C1orf105O95561 183 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 CYP2A6P11509 494 aaPredicted RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 PBLDP30039 288 aaPredicted RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 FGF9P31371 208 aaPredicted RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 EVX1P49640 407 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 RRAS2P62070 204 aaPredicted RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 ABATP80404 500 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 HENMT1Q5T8I9 393 aaKnown RBP14.69□□□□□ -0.06
DDX55-201ENST00000238146 Q6ZVU0 165 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 ZNF767PQ75MW2 155 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 ZFP41Q8N8Y5 198 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 UFD1Q92890 307 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 LMLNQ96KR4 655 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 QRFPRQ96P65 431 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 TMEM43Q9BTV4 400 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 CFAP97Q9P2B7 532 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 HSPB11Q9Y547 144 aa14.69□□□□□ -0.06
DDX55-201ENST00000238146 ANHXE9PGG2 379 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 B4GALT2O60909 372 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 EPHX1P07099 455 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 PRKAR2AP13861 404 aaKnown RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 ARSBP15848 533 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 ZNF30P17039 623 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 PKLRP30613 574 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 GABRA5P31644 462 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 POLR2LP62875 67 aaKnown RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 COX10Q12887 443 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 IL18Q14116 193 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 SNAPC1Q16533 368 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 CST9Q5W186 159 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 HIST2H2AA3Q6FI13 130 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 CD200R1LQ6Q8B3 271 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 METAP1DQ6UB28 335 aaPredicted RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 IKBIPQ70UQ0 350 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 COMTD1Q86VU5 262 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 CPXM2Q8N436 756 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 TRAM1L1Q8N609 369 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 PLA2G15Q8NCC3 412 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 TIFAQ96CG3 184 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 CLIP3Q96DZ5 547 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 SENP5Q96HI0 755 aaPredicted RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 KCNJ15Q99712 375 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 HDHD5Q9BXW7 423 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 MRPL9Q9BYD2 267 aaKnown RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 IL21Q9HBE4 155 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms