RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CPNE9Q8IYJ1 553 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 FAXDC2Q96IV6 333 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 TMEM248Q9NWD8 314 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 GXYLT2A0PJZ3 443 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 IMPA2O14732 288 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 MAP4K2Q12851 820 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 FSTL4Q6MZW2 842 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 IRF7Q92985 503 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 SDSLQ96GA7 329 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 TMEM109Q9BVC6 243 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 GABRQQ9UN88 632 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 TDRD6O60522 2096 aaKnown RBP10.65□□□□□ -0.7
MSH6-201ENST00000234420 WNT9AO14904 365 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 B4GALT4O60513 344 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 IGFBP1P08833 259 aaPredicted RBP10.65□□□□□ -0.71
MSH6-201ENST00000234420 DLDP09622 509 aaKnown RBP10.65□□□□□ -0.71
MSH6-201ENST00000234420 AMY2BP19961 511 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 GRPRP30550 384 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 GRIA2P42262 883 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 HES1Q14469 280 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 C12orf40Q86WS4 652 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 EID2Q8N6I1 236 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 FZD4Q9ULV1 537 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 ARGFXA6NJG6 315 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 ENGP17813 658 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 NAT1P18440 290 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 ELOCQ15369 112 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 CDKN3Q16667 212 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 TIGD5Q53EQ6 642 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 ACDQ96AP0 544 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 RDH12Q96NR8 316 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 P2RY13Q9BPV8 354 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 TSSK6Q9BXA6 273 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 FN3KRPQ9HA64 309 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 ZBTB20Q9HC78 741 aaPredicted RBP10.65□□□□□ -0.71
MSH6-201ENST00000234420 UTS2RQ9UKP6 389 aa10.65□□□□□ -0.71
MSH6-201ENST00000234420 A0A1W2PQ45 241 aaPredicted RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 A0A1W2PQY0 241 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 DUX1O43812 170 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 CLDN11O75508 207 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 BEST1O76090 585 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 ABRAXAS2Q15018 415 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 PEA15Q15121 130 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 VAMP3Q15836 100 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 ZNF852Q6ZMS4 543 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 REM2Q8IYK8 340 aaPredicted RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 DNTTIP1Q9H147 329 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 XPNPEP1Q9NQW7 623 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 SLC2A4RGQ9NR83 387 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 COPS3Q9UNS2 423 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 A0A1W2PRB8 838 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 TCRBV7S2A1N4TA0A589 114 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 BTNL10A8MVZ5 291 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 INSIG1O15503 277 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 KCNC1P48547 511 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 KHKP50053 298 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 SMAD2Q15796 467 aaKnown RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 MCATQ8IVS2 390 aaKnown RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 FAM217AQ8IXS0 508 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 LILRB2Q8N423 598 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 HNRNPABQ99729 332 aaKnown RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 PDCD1LG2Q9BQ51 273 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 DUSP26Q9BV47 211 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 KATNBL1Q9H079 304 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 DECR2Q9NUI1 292 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 THUMPD1Q9NXG2 353 aaKnown RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 LAMP5Q9UJQ1 280 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 HCRTR2O43614 444 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 SOX30O94993 753 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 SLC2A1P11166 492 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 OR4D2P58180 307 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 EIPR1Q53HC9 387 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 PDZD11Q5EBL8 140 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 OR52E4Q8NGH9 312 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 POTEKPQ9BYX7 375 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 TEX51A0A1B0GUA7 166 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 FAM230AA0A1W2PPH8 454 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 ADAMTS3O15072 1205 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 CA12O43570 354 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 SC5DO75845 299 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 ATE1O95260 518 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 LYPLA2O95372 231 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 GOT2P00505 430 aaKnown RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 GGT2P36268 569 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 POLR2HP52434 150 aaKnown RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 CEACAM19Q7Z692 300 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 DEFB123Q8N688 67 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 MRPL38Q96DV4 380 aaKnown RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 PYURFQ96I23 114 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 MOB1AQ9H8S9 216 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 ICKQ9UPZ9 632 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 CLIC1O00299 241 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 IFNGR1P15260 489 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 CLINT1Q14677 625 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 ZNF585AQ6P3V2 769 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 CDHR3Q6ZTQ4 885 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 ZNF367Q7RTV3 350 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 GEMIN6Q8WXD5 167 aaKnown RBP10.64□□□□□ -0.71
MSH6-201ENST00000234420 CHFRQ96EP1 664 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 RNF32Q9H0A6 362 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms