RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 MIXL1Q9H2W2 232 aa13.46□□□□□ -0.25
PCDHB3-201ENST00000231130 GSAPA4D1B5 854 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 ADAM12O43184 909 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 HPGDSO60760 199 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 STC2O76061 302 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 ANXA3P12429 323 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 PTNP21246 168 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 RPS13P62277 151 aaKnown RBP13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 POLR2GP62487 172 aaKnown RBP eCLIP13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 CSTF1Q05048 431 aaKnown RBP13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 RING1Q06587 406 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 PUDPQ08623 228 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 C1DQ13901 141 aaKnown RBP13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 EIF4HQ15056 248 aaKnown RBP13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 BICRALQ6AI39 1079 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 MMP21Q8N119 569 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 SCAMP4Q969E2 229 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 TSSK6Q9BXA6 273 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 OR51B5Q9H339 312 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 STARD7Q9NQZ5 370 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 GPATCH2Q9NW75 528 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 ASIC5Q9NY37 505 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 MGAT4BQ9UQ53 548 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 PADI2Q9Y2J8 665 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 PLXNB2O15031 1838 aa13.46□□□□□ -0.26
PCDHB3-201ENST00000231130 GBF1Q92538 1859 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 MKI67P46013 3256 aaKnown RBP13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 PRSS44E7EML9 344 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 SCAMP2O15127 329 aaKnown RBP13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 NSG1P42857 185 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 CAPZA2P47755 286 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 PREPP48147 710 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 CSNK1DP48730 415 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 CTBP2P56545 445 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 PLD1Q13393 1074 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 RIN1Q13671 783 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 DUSP6Q16828 381 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 SLC5A12Q1EHB4 618 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 RTP2Q5QGT7 225 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 TMPRSS11BQ86T26 416 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 C9orf43Q8TAL5 461 aaPredicted RBP13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 TBC1D20Q96BZ9 403 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 SAMD11Q96NU1 681 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 TBC1D17Q9HA65 648 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 NUDT15Q9NV35 164 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 RUVBL1Q9Y265 456 aaKnown RBP13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 A0A0A6YYJ9 748 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 TCRBV16S1A1N1A0A5B0 115 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 HOXB6P17509 224 aaKnown RBP13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 CD9P21926 228 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 CRYBB2P43320 205 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 INSL4Q14641 139 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 CDKL4Q5MAI5 379 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 HECTD3Q5T447 861 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 GPAT4Q86UL3 456 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 FTMTQ8N4E7 242 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 MS4A15Q8N5U1 240 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 FAM46DQ8NEK8 389 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 RAD9AQ99638 391 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 HTATIP2Q9BUP3 242 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 EDARQ9UNE0 448 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 GPR52Q9Y2T5 361 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 RGS11O94810 467 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 SCG5P05408 212 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 TPOP07202 933 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 GSTM5P46439 218 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 FAM110CQ1W6H9 321 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 GPR139Q6DWJ6 353 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 TAS1R1Q7RTX1 841 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 GPALPP1Q8IXQ4 340 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 MYLIPQ8WY64 445 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 ART5Q96L15 291 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 KLHL15Q96M94 604 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 NELL2Q99435 816 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 PIP5K1AQ99755 562 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 TTYH1Q9H313 450 aaPredicted RBP13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 PIGUQ9H490 435 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 BRD9Q9H8M2 597 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 TXNL4BQ9NX01 149 aaKnown RBP13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 SEC14L4Q9UDX3 406 aa13.45□□□□□ -0.26
PCDHB3-201ENST00000231130 ANKDD1BA6NHY2 528 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 C5orf58C9J3I9 102 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 AKAP8O43823 692 aaKnown RBP13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 TRIM3O75382 744 aaPredicted RBP13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 ZNF254O75437 659 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 IFNW1P05000 195 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 OR56A5P0C7T3 313 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 ALDH9A1P49189 494 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 STK19P49842 368 aaPredicted RBP13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 LSM11P83369 360 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 SMAD3P84022 425 aaKnown RBP13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 MTAPQ13126 283 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 TEAD4Q15561 434 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 GLYR1Q49A26 553 aaPredicted RBP13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 ADGRF1Q5T601 910 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 ADGRG3Q86Y34 549 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 UROC1Q96N76 676 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 C5AR2Q9P296 337 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 CLEC4AQ9UMR7 237 aa13.44□□□□□ -0.26
PCDHB3-201ENST00000231130 STUB1Q9UNE7 303 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms