RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SLC5A11Q8WWX8 675 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 ASF1BQ9NVP2 202 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 ABCD2Q9UBJ2 740 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 A0A1B0GVT2 93 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 METTL15A6NJ78 407 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
HCFC2-201ENST00000229330 PIRO00625 290 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 SCAMP2O15127 329 aaKnown RBP13.2□□□□□ -0.3
HCFC2-201ENST00000229330 GMFGO60234 142 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 CYB5AP00167 134 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 JUPP14923 745 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 ETV1P50549 477 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 FXYD6P3P58550 94 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 OTUB2Q96DC9 234 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 CNTNAP3BQ96NU0 1288 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 OR2M2Q96R28 347 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 C7orf50Q9BRJ6 194 aaKnown RBP13.2□□□□□ -0.3
HCFC2-201ENST00000229330 ACTR10Q9NZ32 417 aa13.2□□□□□ -0.3
HCFC2-201ENST00000229330 M0R129 80 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 RPL17P18621 184 aaKnown RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 CCND3P30281 292 aaPredicted RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 SOX2P48431 317 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 ADARB1P78563 741 aaKnown RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 RPL19P84098 196 aaKnown RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 VEZF1Q14119 521 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 GDF6Q6KF10 455 aaPredicted RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 PSAPL1Q6NUJ1 521 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 RANBP10Q6VN20 620 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 SGTBQ96EQ0 304 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 IGFBP4P22692 258 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 MLLT3P42568 568 aaPredicted RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 ADGRF1Q5T601 910 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 NDUFAF5Q5TEU4 345 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 SHFQ7M4L6 423 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 WDR53Q7Z5U6 358 aaPredicted RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 DNAJC5GQ8N7S2 189 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 MFSD8Q8NHS3 518 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 ARL11Q969Q4 196 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 ZNF514Q96K75 400 aaPredicted RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 KRBOX1C9JBD0 128 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 F5H5P2 479 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 SGCEO43556 437 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 GMDSO60547 372 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 SOX30O94993 753 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 AHCYP23526 432 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 C18orf21Q32NC0 220 aaPredicted RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 FLYWCH1Q4VC44 716 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 CPZQ66K79 652 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 CLEC14AQ86T13 490 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 ACVR1CQ8NER5 493 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 RIOK2Q9BVS4 552 aaKnown RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 MRPS30Q9NP92 439 aaKnown RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 B3GALT2O43825 422 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 PRNPP04156 253 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 RPS17P08708 135 aaKnown RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 OR12D1P0DN82 309 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 CTSEP14091 401 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 ZNF20P17024 532 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 ODF4Q2M2E3 257 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 SYT6Q5T7P8 510 aaPredicted RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 CES4AQ5XG92 561 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 PRSS55Q6UWB4 352 aaPredicted RBP13.19□□□□□ -0.3
HCFC2-201ENST00000229330 SERPINA11Q86U17 422 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 IQCF1Q8N6M8 205 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 TMEM185AQ8NFB2 350 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 KCNN3Q9UGI6 736 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 COLEC10Q9Y6Z7 277 aa13.19□□□□□ -0.3
HCFC2-201ENST00000229330 H3BSH0 61 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 RBMXL2O75526 392 aaKnown RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 BMP1P13497 986 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 GCGRP47871 477 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 LRRC26Q2I0M4 334 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 SLC8B1Q6J4K2 584 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 ZNF101Q8IZC7 436 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 ZDHHC1Q8WTX9 485 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 THEM6Q8WUY1 208 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 KLHL21Q9UJP4 597 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 C14orf166Q9Y224 244 aaKnown RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 A3GALT2U3KPV4 340 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 NAP1L6A6NFF2 107 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 CCL16O15467 120 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 RRAS2P62070 204 aaPredicted RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 NFATC2Q13469 925 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 OR52N2Q8NGI0 321 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 RBM18Q96H35 190 aaKnown RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 ZNF300Q96RE9 604 aaPredicted RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 UQCC2Q9BRT2 126 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 EIF5A2Q9GZV4 153 aaKnown RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 HEBP1Q9NRV9 189 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 SLAMF8Q9P0V8 285 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 KLK4Q9Y5K2 254 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 CRYBG1Q9Y4K1 1723 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 A0A1B0GTW7 788 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 INPPL1O15357 1258 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 ERI3O43414 337 aaKnown RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 UCHL1P09936 223 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 POLR2IP36954 125 aaKnown RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 RACK1P63244 317 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms