RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 B3GNT7Q8NFL0 401 aa16.76■□□□□ 0.27
PFN1-201ENST00000225655 ZNF395Q9H8N7 513 aaPredicted RBP16.76■□□□□ 0.27
PFN1-201ENST00000225655 WDR41Q9HAD4 459 aa16.76■□□□□ 0.27
PFN1-201ENST00000225655 LRTM1Q9HBL6 345 aa16.76■□□□□ 0.27
PFN1-201ENST00000225655 C1orf109Q9NX04 203 aa16.76■□□□□ 0.27
PFN1-201ENST00000225655 ZNF835Q9Y2P0 537 aa16.76■□□□□ 0.27
PFN1-201ENST00000225655 KLF2Q9Y5W3 355 aaPredicted RBP16.76■□□□□ 0.27
PFN1-201ENST00000225655 CREBBPQ92793 2442 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 GNG14A0A1W2PPG7 69 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 SYNDIG1LA6NDD5 238 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 A8MUA0 341 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 FCHO1O14526 889 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 SEC22BO75396 215 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 KLK1P06870 262 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 CPN2P22792 545 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 MAPK1P28482 360 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 BSGP35613 385 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 CLCN2P51788 898 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 BTKQ06187 659 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 UGT3A2Q3SY77 523 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 SP5Q6BEB4 398 aaPredicted RBP16.75■□□□□ 0.27
PFN1-201ENST00000225655 Q6ZPB1 254 aaPredicted RBP16.75■□□□□ 0.27
PFN1-201ENST00000225655 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.75■□□□□ 0.27
PFN1-201ENST00000225655 GPR180Q86V85 440 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 WDR75Q8IWA0 830 aaKnown RBP16.75■□□□□ 0.27
PFN1-201ENST00000225655 ZNF808Q8N4W9 903 aaPredicted RBP16.75■□□□□ 0.27
PFN1-201ENST00000225655 PIWIL2Q8TC59 973 aaKnown RBP16.75■□□□□ 0.27
PFN1-201ENST00000225655 CHTF18Q8WVB6 975 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 MAGED4Q96JG8 741 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 C20orf27Q9GZN8 174 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 TSPAN10Q9H1Z9 355 aaPredicted RBP16.75■□□□□ 0.27
PFN1-201ENST00000225655 PRTFDC1Q9NRG1 225 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 MCM8Q9UJA3 840 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 DAPP1Q9UN19 280 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 TMED5Q9Y3A6 229 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 CLDN16Q9Y5I7 305 aa16.75■□□□□ 0.27
PFN1-201ENST00000225655 A0A0A6YYD5 115 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 TRBV11-1A0A0K0K1C0 115 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 NPIPA5E9PKD4 350 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 HDAC3O15379 428 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 PCDH7O60245 1069 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 FAM58BPP0C7Q3 252 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 KITP10721 976 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 PRPH2P23942 346 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 HNRNPFP52597 415 aaKnown RBP16.74■□□□□ 0.27
PFN1-201ENST00000225655 LIM2P55344 173 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 TRA2BP62995 288 aaKnown RBP16.74■□□□□ 0.27
PFN1-201ENST00000225655 TBL3Q12788 808 aaKnown RBP16.74■□□□□ 0.27
PFN1-201ENST00000225655 SLC13A2Q13183 592 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 MAD2L1Q13257 205 aaPredicted RBP16.74■□□□□ 0.27
PFN1-201ENST00000225655 ZNF793Q6ZN11 406 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 MRGPRGQ86SM5 289 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 SPPL2CQ8IUH8 684 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 ZNF595Q8IYB9 648 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 MARVELD3Q96A59 401 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 TMEM125Q96AQ2 219 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 TUBGCP3Q96CW5 907 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 VMP1Q96GC9 406 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 FAIM2Q9BWQ8 316 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 SORBS1Q9BX66 1292 aaKnown RBP16.74■□□□□ 0.27
PFN1-201ENST00000225655 PNO1Q9NRX1 252 aaKnown RBP16.74■□□□□ 0.27
PFN1-201ENST00000225655 PNPOQ9NVS9 261 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 MARCOQ9UEW3 520 aaPredicted RBP16.74■□□□□ 0.27
PFN1-201ENST00000225655 SH3BGRL2Q9UJC5 107 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 FBXW2Q9UKT8 454 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 NPIPA1Q9UND3 350 aa16.74■□□□□ 0.27
PFN1-201ENST00000225655 NPIPB8E9PQR5 432 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 TGFBR3LH3BV60 316 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 CYR61O00622 381 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 ASNA1O43681 348 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 EEDO75530 441 aaKnown RBP16.73■□□□□ 0.27
PFN1-201ENST00000225655 ZNF24P17028 368 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 PPP2R1BP30154 601 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 TIA1P31483 386 aaKnown RBP eCLIP16.73■□□□□ 0.276e-64■■■■■ 30
PFN1-201ENST00000225655 GPR143P51810 404 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 C3AR1Q16581 482 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 GALNTL6Q49A17 601 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 XKR7Q5GH72 579 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 BNC2Q6ZN30 1099 aaPredicted RBP16.73■□□□□ 0.27
PFN1-201ENST00000225655 FAM47BQ8NA70 645 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 TMEM52Q8NDY8 209 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 TUBB1Q9H4B7 451 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 ADAP2Q9NPF8 381 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 SIRT5Q9NXA8 310 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 TINAGQ9UJW2 476 aa16.73■□□□□ 0.27
PFN1-201ENST00000225655 ZNF223Q9UK11 482 aaPredicted RBP16.73■□□□□ 0.27
PFN1-201ENST00000225655 NCOA6Q14686 2063 aaPredicted RBP16.73■□□□□ 0.27
PFN1-201ENST00000225655 GTF3C1Q12789 2109 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 PCNX1Q96RV3 2341 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 ANXA4P09525 319 aaPredicted RBP16.72■□□□□ 0.27
PFN1-201ENST00000225655 NR2F6P10588 404 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 MDH1P40925 334 aaKnown RBP16.72■□□□□ 0.27
PFN1-201ENST00000225655 RPL38P63173 70 aaKnown RBP16.72■□□□□ 0.27
PFN1-201ENST00000225655 ELAVL1Q15717 326 aaKnown RBP16.72■□□□□ 0.27
PFN1-201ENST00000225655 RNFT1Q5M7Z0 435 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 GALNT18Q6P9A2 607 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 XKRXQ6PP77 449 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 FAM47EQ6ZV65 393 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 LRRC34Q8IZ02 419 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 GHDCQ8N2G8 530 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms