RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 FOXN1O15353 648 aa20.25■□□□□ 0.83
SRRM4-204ENST00000641899 EAPPQ56P03 285 aaPredicted RBP20.25■□□□□ 0.83
SRRM4-204ENST00000641899 CLEC4GQ6UXB4 293 aa20.25■□□□□ 0.83
SRRM4-204ENST00000641899 RTKN2Q8IZC4 609 aa20.25■□□□□ 0.83
SRRM4-204ENST00000641899 HACL1Q9UJ83 578 aa20.25■□□□□ 0.83
SRRM4-204ENST00000641899 PASKQ96RG2 1323 aa20.25■□□□□ 0.83
SRRM4-204ENST00000641899 CAMTA2O94983 1202 aa20.24■□□□□ 0.83
SRRM4-204ENST00000641899 NPR1P16066 1061 aa20.24■□□□□ 0.83
SRRM4-204ENST00000641899 U2SURPO15042 1029 aaKnown RBP20.23■□□□□ 0.83
SRRM4-204ENST00000641899 A1BGP04217 495 aa20.23■□□□□ 0.83
SRRM4-204ENST00000641899 POTEIP0CG38 1075 aa20.23■□□□□ 0.83
SRRM4-204ENST00000641899 POTEJP0CG39 1038 aa20.23■□□□□ 0.83
SRRM4-204ENST00000641899 FKBP4Q02790 459 aaKnown RBP eCLIP20.23■□□□□ 0.83
SRRM4-204ENST00000641899 TPTE2Q6XPS3 522 aa20.23■□□□□ 0.83
SRRM4-204ENST00000641899 BTBD11A6QL63 1104 aa20.22■□□□□ 0.83
SRRM4-204ENST00000641899 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
SRRM4-204ENST00000641899 RGL2O15211 777 aa20.21■□□□□ 0.83
SRRM4-204ENST00000641899 ALDH1B1P30837 517 aa20.21■□□□□ 0.83
SRRM4-204ENST00000641899 VEGFBP49765 207 aa20.21■□□□□ 0.83
SRRM4-204ENST00000641899 MAP2K1Q02750 393 aaPredicted RBP20.21■□□□□ 0.83
SRRM4-204ENST00000641899 IL17REQ8NFR9 667 aa20.21■□□□□ 0.83
SRRM4-204ENST00000641899 EPHX2P34913 555 aa20.2■□□□□ 0.82
SRRM4-204ENST00000641899 GTF2E1P29083 439 aaPredicted RBP20.19■□□□□ 0.82
SRRM4-204ENST00000641899 DEFB115Q30KQ5 88 aa20.19■□□□□ 0.82
SRRM4-204ENST00000641899 CC2D1BQ5T0F9 858 aaKnown RBP20.19■□□□□ 0.82
SRRM4-204ENST00000641899 JDP2Q8WYK2 163 aa20.19■□□□□ 0.82
SRRM4-204ENST00000641899 WBP1LQ9NX94 342 aa20.19■□□□□ 0.82
SRRM4-204ENST00000641899 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
SRRM4-204ENST00000641899 UBR2Q8IWV8 1755 aa20.18■□□□□ 0.82
SRRM4-204ENST00000641899 ITGBL1O95965 494 aaPredicted RBP20.18■□□□□ 0.82
SRRM4-204ENST00000641899 C7orf43Q8WVR3 580 aa20.18■□□□□ 0.82
SRRM4-204ENST00000641899 RTF1Q92541 710 aaKnown RBP20.18■□□□□ 0.82
SRRM4-204ENST00000641899 BEGAINQ9BUH8 593 aa20.18■□□□□ 0.82
SRRM4-204ENST00000641899 FER1L6Q2WGJ9 1857 aa20.18■□□□□ 0.82
SRRM4-204ENST00000641899 RASSF10A6NK89 507 aa20.17■□□□□ 0.82
SRRM4-204ENST00000641899 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
SRRM4-204ENST00000641899 LBX1P52954 281 aa20.17■□□□□ 0.82
SRRM4-204ENST00000641899 CNTROBQ8N137 903 aa20.17■□□□□ 0.82
SRRM4-204ENST00000641899 ZNF277Q9NRM2 450 aaPredicted RBP20.17■□□□□ 0.82
SRRM4-204ENST00000641899 ABT1Q9ULW3 272 aaKnown RBP20.17■□□□□ 0.82
SRRM4-204ENST00000641899 CCDC88AQ3V6T2 1871 aa20.16■□□□□ 0.82
SRRM4-204ENST00000641899 LMOD1P29536 600 aaPredicted RBP20.16■□□□□ 0.82
SRRM4-204ENST00000641899 IARSP41252 1262 aaKnown RBP20.16■□□□□ 0.82
SRRM4-204ENST00000641899 GRIPAP1Q4V328 841 aa20.16■□□□□ 0.82
SRRM4-204ENST00000641899 GPC2Q8N158 579 aa20.16■□□□□ 0.82
SRRM4-204ENST00000641899 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
SRRM4-204ENST00000641899 NIP7Q9Y221 180 aaKnown RBP eCLIP20.16■□□□□ 0.82
SRRM4-204ENST00000641899 DICER1Q9UPY3 1922 aaKnown RBP20.15■□□□□ 0.82
SRRM4-204ENST00000641899 KLRG2A4D1S0 409 aaPredicted RBP20.15■□□□□ 0.82
SRRM4-204ENST00000641899 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
SRRM4-204ENST00000641899 CC2D2BQ6DHV5 1058 aa20.15■□□□□ 0.82
SRRM4-204ENST00000641899 ANKRD31Q8N7Z5 1873 aa20.14■□□□□ 0.81
SRRM4-204ENST00000641899 CEMIPQ8WUJ3 1361 aa20.14■□□□□ 0.81
SRRM4-204ENST00000641899 ECE1P42892 770 aa20.14■□□□□ 0.81
SRRM4-204ENST00000641899 SCN4AP35499 1836 aa20.13■□□□□ 0.81
SRRM4-204ENST00000641899 COL11A2P13942 1736 aaPredicted RBP20.13■□□□□ 0.81
SRRM4-204ENST00000641899 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
SRRM4-204ENST00000641899 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
SRRM4-204ENST00000641899 FZD9O00144 591 aa20.13■□□□□ 0.81
SRRM4-204ENST00000641899 SYNE4Q8N205 404 aa20.13■□□□□ 0.81
SRRM4-204ENST00000641899 NYXQ9GZU5 481 aa20.13■□□□□ 0.81
SRRM4-204ENST00000641899 NUDCQ9Y266 331 aa20.13■□□□□ 0.81
SRRM4-204ENST00000641899 USP16Q9Y5T5 823 aa20.13■□□□□ 0.81
SRRM4-204ENST00000641899 KIF7Q2M1P5 1343 aa20.12■□□□□ 0.81
SRRM4-204ENST00000641899 RNF123Q5XPI4 1314 aa20.12■□□□□ 0.81
SRRM4-204ENST00000641899 MAP1SQ66K74 1059 aaPredicted RBP20.12■□□□□ 0.81
SRRM4-204ENST00000641899 PSMD1Q99460 953 aa20.12■□□□□ 0.81
SRRM4-204ENST00000641899 TMX4Q9H1E5 349 aaPredicted RBP20.12■□□□□ 0.81
SRRM4-204ENST00000641899 ABHD8Q96I13 439 aa20.11■□□□□ 0.81
SRRM4-204ENST00000641899 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
SRRM4-204ENST00000641899 PER1O15534 1290 aaPredicted RBP20.1■□□□□ 0.81
SRRM4-204ENST00000641899 HSPA8P11142 646 aaKnown RBP20.1■□□□□ 0.81
SRRM4-204ENST00000641899 PAXIP1Q6ZW49 1069 aaPredicted RBP20.1■□□□□ 0.81
SRRM4-204ENST00000641899 SLX4Q8IY92 1834 aa20.1■□□□□ 0.81
SRRM4-204ENST00000641899 FAM177BA6PVY3 158 aa20.09■□□□□ 0.81
SRRM4-204ENST00000641899 PRKAR2BP31323 418 aa20.09■□□□□ 0.81
SRRM4-204ENST00000641899 DDX21Q9NR30 783 aaKnown RBP eCLIP20.09■□□□□ 0.81
SRRM4-204ENST00000641899 GJA3Q9Y6H8 435 aa20.09■□□□□ 0.81
SRRM4-204ENST00000641899 KCNQ3O43525 872 aa20.08■□□□□ 0.81
SRRM4-204ENST00000641899 PIP4K2AP48426 406 aaPredicted RBP20.08■□□□□ 0.81
SRRM4-204ENST00000641899 RPGRQ92834 1020 aaKnown RBP20.08■□□□□ 0.81
SRRM4-204ENST00000641899 ARFGEF2Q9Y6D5 1785 aa20.07■□□□□ 0.8
SRRM4-204ENST00000641899 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
SRRM4-204ENST00000641899 USP50Q70EL3 339 aaPredicted RBP20.06■□□□□ 0.8
SRRM4-204ENST00000641899 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
SRRM4-204ENST00000641899 VIRMAQ69YN4 1812 aaKnown RBP20.05■□□□□ 0.8
SRRM4-204ENST00000641899 NEFMP07197 916 aa20.05■□□□□ 0.8
SRRM4-204ENST00000641899 CNGB1Q14028 1251 aaPredicted RBP20.05■□□□□ 0.8
SRRM4-204ENST00000641899 LARGE2Q8N3Y3 721 aa20.05■□□□□ 0.8
SRRM4-204ENST00000641899 CAPNS2Q96L46 248 aa20.05■□□□□ 0.8
SRRM4-204ENST00000641899 GPR101Q96P66 508 aaPredicted RBP20.05■□□□□ 0.8
SRRM4-204ENST00000641899 CA12O43570 354 aa20.04■□□□□ 0.8
SRRM4-204ENST00000641899 SLC34A2O95436 690 aa20.04■□□□□ 0.8
SRRM4-204ENST00000641899 FAM161AQ3B820 660 aa20.04■□□□□ 0.8
SRRM4-204ENST00000641899 CRY2Q49AN0 593 aa20.04■□□□□ 0.8
SRRM4-204ENST00000641899 OLFM4Q6UX06 510 aa20.04■□□□□ 0.8
SRRM4-204ENST00000641899 KIF6Q6ZMV9 814 aa20.04■□□□□ 0.8
SRRM4-204ENST00000641899 PHACTR3Q96KR7 559 aa20.04■□□□□ 0.8
SRRM4-204ENST00000641899 RSPH6AQ9H0K4 717 aa20.04■□□□□ 0.8
SRRM4-204ENST00000641899 COL3A1P02461 1466 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms