RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
PHGDH-228ENST00000641847 NFKBIEO00221 500 aa12.23□□□□□ -0.45
PHGDH-228ENST00000641847 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
PHGDH-228ENST00000641847 DCTN1Q14203 1278 aa12.23□□□□□ -0.45
PHGDH-228ENST00000641847 MCM10Q7L590 875 aa12.23□□□□□ -0.45
PHGDH-228ENST00000641847 THUMPD2Q9BTF0 503 aaKnown RBP12.23□□□□□ -0.45
PHGDH-228ENST00000641847 MRC1P22897 1456 aa12.22□□□□□ -0.45
PHGDH-228ENST00000641847 SERPINB2P05120 415 aa12.22□□□□□ -0.45
PHGDH-228ENST00000641847 CALD1Q05682 793 aaKnown RBP12.22□□□□□ -0.45
PHGDH-228ENST00000641847 DEFB115Q30KQ5 88 aa12.22□□□□□ -0.45
PHGDH-228ENST00000641847 WDR63Q8IWG1 891 aa12.22□□□□□ -0.45
PHGDH-228ENST00000641847 ZNF622Q969S3 477 aaKnown RBP eCLIP12.22□□□□□ -0.453e-9■■■□□ 17.8
PHGDH-228ENST00000641847 SIPA1L3O60292 1781 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-228ENST00000641847 CEMIPQ8WUJ3 1361 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 IL16Q14005 1332 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 PASKQ96RG2 1323 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 HSPA8P11142 646 aaKnown RBP12.21□□□□□ -0.45
PHGDH-228ENST00000641847 RGS19P49795 217 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 NFIXQ14938 502 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 SOGA3Q5TF21 947 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 IL17REQ8NFR9 667 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 TAOK3Q9H2K8 898 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 NARFQ9UHQ1 456 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
PHGDH-228ENST00000641847 RNMTO43148 476 aaKnown RBP12.2□□□□□ -0.46
PHGDH-228ENST00000641847 C21orf2O43822 256 aa12.2□□□□□ -0.46
PHGDH-228ENST00000641847 DDNO94850 711 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-228ENST00000641847 PDE6BP35913 854 aa12.2□□□□□ -0.46
PHGDH-228ENST00000641847 INTS5Q6P9B9 1019 aaKnown RBP12.2□□□□□ -0.46
PHGDH-228ENST00000641847 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
PHGDH-228ENST00000641847 CDCA7LQ96GN5 454 aa12.2□□□□□ -0.46
PHGDH-228ENST00000641847 E9PSI1 815 aa12.19□□□□□ -0.46
PHGDH-228ENST00000641847 NPHP1O15259 732 aa12.19□□□□□ -0.46
PHGDH-228ENST00000641847 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
PHGDH-228ENST00000641847 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
PHGDH-228ENST00000641847 EAPPQ56P03 285 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-228ENST00000641847 LGR6Q9HBX8 967 aa12.19□□□□□ -0.46
PHGDH-228ENST00000641847 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-228ENST00000641847 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-228ENST00000641847 ABT1Q9ULW3 272 aaKnown RBP12.19□□□□□ -0.46
PHGDH-228ENST00000641847 KDM3BQ7LBC6 1761 aa12.19□□□□□ -0.46
PHGDH-228ENST00000641847 LTBP3Q9NS15 1303 aa12.18□□□□□ -0.46
PHGDH-228ENST00000641847 COL5A3P25940 1745 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-228ENST00000641847 RASSF10A6NK89 507 aa12.18□□□□□ -0.46
PHGDH-228ENST00000641847 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
PHGDH-228ENST00000641847 PNMA8AQ86V59 439 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-228ENST00000641847 TAF1DQ9H5J8 278 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-228ENST00000641847 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
PHGDH-228ENST00000641847 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
PHGDH-228ENST00000641847 TIAM2Q8IVF5 1701 aa12.17□□□□□ -0.46
PHGDH-228ENST00000641847 SOS1Q07889 1333 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-228ENST00000641847 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
PHGDH-228ENST00000641847 FANCIQ9NVI1 1328 aa12.17□□□□□ -0.46
PHGDH-228ENST00000641847 ECE1P42892 770 aa12.17□□□□□ -0.46
PHGDH-228ENST00000641847 TEFQ10587 303 aa12.17□□□□□ -0.46
PHGDH-228ENST00000641847 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
PHGDH-228ENST00000641847 L3MBTL3Q96JM7 780 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-228ENST00000641847 BRIP1Q9BX63 1249 aa12.17□□□□□ -0.46
PHGDH-228ENST00000641847 MYH16Q9H6N6 1097 aa12.17□□□□□ -0.46
PHGDH-228ENST00000641847 A0A087WZG4 1122 aa12.16□□□□□ -0.46
PHGDH-228ENST00000641847 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-228ENST00000641847 CENPBP07199 599 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-228ENST00000641847 ZNF853P0CG23 659 aa12.16□□□□□ -0.46
PHGDH-228ENST00000641847 GNAI1P63096 354 aa12.16□□□□□ -0.46
PHGDH-228ENST00000641847 TSR2Q969E8 191 aaKnown RBP12.16□□□□□ -0.46
PHGDH-228ENST00000641847 HACL1Q9UJ83 578 aa12.16□□□□□ -0.46
PHGDH-228ENST00000641847 COL15A1P39059 1388 aa12.16□□□□□ -0.46
PHGDH-228ENST00000641847 DUSP27Q5VZP5 1158 aa12.15□□□□□ -0.46
PHGDH-228ENST00000641847 BICDL1Q6ZP65 573 aa12.15□□□□□ -0.46
PHGDH-228ENST00000641847 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-228ENST00000641847 NPM2Q86SE8 214 aaKnown RBP12.15□□□□□ -0.46
PHGDH-228ENST00000641847 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
PHGDH-228ENST00000641847 TRMT2AQ8IZ69 625 aaKnown RBP12.15□□□□□ -0.46
PHGDH-228ENST00000641847 CNTROBQ8N137 903 aa12.15□□□□□ -0.46
PHGDH-228ENST00000641847 SLC52A2Q9HAB3 445 aa12.15□□□□□ -0.46
PHGDH-228ENST00000641847 TSPYL4Q9UJ04 414 aa12.15□□□□□ -0.46
PHGDH-228ENST00000641847 MYH14Q7Z406 1995 aaKnown RBP12.15□□□□□ -0.46
PHGDH-228ENST00000641847 CYP19A1P11511 503 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-228ENST00000641847 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-228ENST00000641847 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
PHGDH-228ENST00000641847 TNRC18O15417 2968 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-228ENST00000641847 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
PHGDH-228ENST00000641847 CHL1O00533 1208 aa12.13□□□□□ -0.47
PHGDH-228ENST00000641847 CA12O43570 354 aa12.13□□□□□ -0.47
PHGDH-228ENST00000641847 STARD3NLO95772 234 aa12.13□□□□□ -0.47
PHGDH-228ENST00000641847 EPHX2P34913 555 aa12.13□□□□□ -0.47
PHGDH-228ENST00000641847 MIS18AQ9NYP9 233 aa12.13□□□□□ -0.47
PHGDH-228ENST00000641847 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
PHGDH-228ENST00000641847 ST5P78524 1137 aa12.12□□□□□ -0.47
PHGDH-228ENST00000641847 GRM1Q13255 1194 aa12.12□□□□□ -0.47
PHGDH-228ENST00000641847 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
PHGDH-228ENST00000641847 CAPNS2Q96L46 248 aa12.12□□□□□ -0.47
PHGDH-228ENST00000641847 GPR101Q96P66 508 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-228ENST00000641847 BABAM1Q9NWV8 329 aa12.12□□□□□ -0.47
PHGDH-228ENST00000641847 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
PHGDH-228ENST00000641847 EXOSC9Q06265 439 aaKnown RBP12.11□□□□□ -0.47
PHGDH-228ENST00000641847 CCDC93Q567U6 631 aa12.11□□□□□ -0.47
PHGDH-228ENST00000641847 MAP1SQ66K74 1059 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms