RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 ARXQ96QS3 562 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 MYD88Q99836 296 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 USP44Q9H0E7 712 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 ANKRD36CQ5JPF3 1778 aa11.03□□□□□ -0.64
PHGDH-219ENST00000641513 APBB1O00213 710 aa11.02□□□□□ -0.65
PHGDH-219ENST00000641513 NUCB1Q02818 461 aa11.02□□□□□ -0.65
PHGDH-219ENST00000641513 CWF19L2Q2TBE0 894 aaKnown RBP11.02□□□□□ -0.65
PHGDH-219ENST00000641513 LNPKQ9C0E8 428 aa11.02□□□□□ -0.65
PHGDH-219ENST00000641513 TRPC5Q9UL62 973 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-219ENST00000641513 NHSQ6T4R5 1651 aa11.01□□□□□ -0.65
PHGDH-219ENST00000641513 NBPF26B4DH59 902 aa11.01□□□□□ -0.65
PHGDH-219ENST00000641513 C8orf34Q49A92 452 aa11.01□□□□□ -0.65
PHGDH-219ENST00000641513 NBPF14Q5TI25 921 aa11.01□□□□□ -0.65
PHGDH-219ENST00000641513 NBPF10Q6P3W6 841 aaKnown RBP11.01□□□□□ -0.65
PHGDH-219ENST00000641513 CHD1LQ86WJ1 897 aa11.01□□□□□ -0.65
PHGDH-219ENST00000641513 NBPF15Q8N660 670 aa11.01□□□□□ -0.65
PHGDH-219ENST00000641513 LINS1Q8NG48 757 aa11.01□□□□□ -0.65
PHGDH-219ENST00000641513 GJD4Q96KN9 370 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-219ENST00000641513 METTL22Q9BUU2 404 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-219ENST00000641513 HDAC5Q9UQL6 1122 aa11.01□□□□□ -0.65
PHGDH-219ENST00000641513 AK9Q5TCS8 1911 aa11□□□□□ -0.65
PHGDH-219ENST00000641513 NBPF7P0C2Y1 421 aaPredicted RBP11□□□□□ -0.65
PHGDH-219ENST00000641513 ATP8B2P98198 1209 aa11□□□□□ -0.65
PHGDH-219ENST00000641513 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
PHGDH-219ENST00000641513 TTLL7Q6ZT98 887 aa11□□□□□ -0.65
PHGDH-219ENST00000641513 NPM2Q86SE8 214 aaKnown RBP11□□□□□ -0.65
PHGDH-219ENST00000641513 PLBD2Q8NHP8 589 aa11□□□□□ -0.65
PHGDH-219ENST00000641513 DCTPP1Q9H773 170 aa11□□□□□ -0.65
PHGDH-219ENST00000641513 COL5A3P25940 1745 aaPredicted RBP11□□□□□ -0.65
PHGDH-219ENST00000641513 ATRNO75882 1429 aa11□□□□□ -0.65
PHGDH-219ENST00000641513 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
PHGDH-219ENST00000641513 KCNQ2O43526 872 aa10.99□□□□□ -0.65
PHGDH-219ENST00000641513 LRP10Q7Z4F1 713 aa10.99□□□□□ -0.65
PHGDH-219ENST00000641513 SMARCC1Q92922 1105 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-219ENST00000641513 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
PHGDH-219ENST00000641513 QTRT2Q9H974 415 aaKnown RBP10.99□□□□□ -0.65
PHGDH-219ENST00000641513 MYH14Q7Z406 1995 aaKnown RBP10.99□□□□□ -0.65
PHGDH-219ENST00000641513 MYH3P11055 1940 aa10.98□□□□□ -0.65
PHGDH-219ENST00000641513 PNMA6EA0A0J9YXQ4 647 aa10.98□□□□□ -0.65
PHGDH-219ENST00000641513 NEURL1BA8MQ27 555 aa10.98□□□□□ -0.65
PHGDH-219ENST00000641513 GRM8O00222 908 aa10.98□□□□□ -0.65
PHGDH-219ENST00000641513 IGKV5-2P06315 115 aa10.98□□□□□ -0.65
PHGDH-219ENST00000641513 ATP6V1AP38606 617 aa10.98□□□□□ -0.65
PHGDH-219ENST00000641513 FAM182BQ5T319 152 aa10.98□□□□□ -0.65
PHGDH-219ENST00000641513 PALLDQ8WX93 1383 aa10.98□□□□□ -0.65
PHGDH-219ENST00000641513 SRGAP3O43295 1099 aa10.97□□□□□ -0.65
PHGDH-219ENST00000641513 SMARCA5O60264 1052 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-219ENST00000641513 CYP19A1P11511 503 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-219ENST00000641513 GCKRQ14397 625 aa10.97□□□□□ -0.65
PHGDH-219ENST00000641513 PPP1R42Q7Z4L9 355 aa10.97□□□□□ -0.65
PHGDH-219ENST00000641513 SEPT12Q8IYM1 358 aa10.97□□□□□ -0.65
PHGDH-219ENST00000641513 SLC4A9Q96Q91 983 aa10.97□□□□□ -0.65
PHGDH-219ENST00000641513 EXOC6BQ9Y2D4 811 aa10.97□□□□□ -0.65
PHGDH-219ENST00000641513 CICQ96RK0 1608 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-219ENST00000641513 ZNF831Q5JPB2 1677 aa10.97□□□□□ -0.65
PHGDH-219ENST00000641513 TAF1LQ8IZX4 1826 aa10.97□□□□□ -0.65
PHGDH-219ENST00000641513 RREB1Q92766 1687 aa10.96□□□□□ -0.65
PHGDH-219ENST00000641513 LOC102724428A0A0B4J2F2 783 aa10.96□□□□□ -0.65
PHGDH-219ENST00000641513 SIK1P57059 783 aa10.96□□□□□ -0.65
PHGDH-219ENST00000641513 JARID2Q92833 1246 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-219ENST00000641513 SUCLG2Q96I99 432 aa10.96□□□□□ -0.65
PHGDH-219ENST00000641513 ZBTB1Q9Y2K1 713 aa10.96□□□□□ -0.65
PHGDH-219ENST00000641513 LY75O60449 1722 aa10.95□□□□□ -0.66
PHGDH-219ENST00000641513 A0A087WZG4 1122 aa10.95□□□□□ -0.66
PHGDH-219ENST00000641513 SURF6O75683 361 aaKnown RBP10.95□□□□□ -0.66
PHGDH-219ENST00000641513 OS9Q13438 667 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-219ENST00000641513 UBE3BQ7Z3V4 1068 aa10.95□□□□□ -0.66
PHGDH-219ENST00000641513 CWC25Q9NXE8 425 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-219ENST00000641513 UTYO14607 1347 aa10.94□□□□□ -0.66
PHGDH-219ENST00000641513 RTL5Q5HYW3 569 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-219ENST00000641513 SSH3Q8TE77 659 aa10.94□□□□□ -0.66
PHGDH-219ENST00000641513 LRRCC1Q9C099 1032 aa10.94□□□□□ -0.66
PHGDH-219ENST00000641513 BICC1Q9H694 974 aaKnown RBP10.94□□□□□ -0.66
PHGDH-219ENST00000641513 CCDC87Q9NVE4 849 aa10.94□□□□□ -0.66
PHGDH-219ENST00000641513 BCORQ6W2J9 1755 aa10.93□□□□□ -0.66
PHGDH-219ENST00000641513 MAP3K15Q6ZN16 1313 aa10.93□□□□□ -0.66
PHGDH-219ENST00000641513 IL6STP40189 918 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-219ENST00000641513 CRKLP46109 303 aaKnown RBP10.93□□□□□ -0.66
PHGDH-219ENST00000641513 TCIRG1Q13488 830 aa10.93□□□□□ -0.66
PHGDH-219ENST00000641513 ITPK1Q13572 414 aa10.93□□□□□ -0.66
PHGDH-219ENST00000641513 POLA2Q14181 598 aa10.93□□□□□ -0.66
PHGDH-219ENST00000641513 C16orf71Q8IYS4 520 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-219ENST00000641513 TUBGCP6Q96RT7 1819 aa10.93□□□□□ -0.66
PHGDH-219ENST00000641513 IBTKQ9P2D0 1353 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-219ENST00000641513 RAB11FIP3O75154 756 aa10.92□□□□□ -0.66
PHGDH-219ENST00000641513 HSP90AB4PQ58FF6 505 aa10.92□□□□□ -0.66
PHGDH-219ENST00000641513 HSP90AB3PQ58FF7 597 aa10.92□□□□□ -0.66
PHGDH-219ENST00000641513 ZNF772Q68DY9 489 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-219ENST00000641513 PTF1AQ7RTS3 328 aa10.92□□□□□ -0.66
PHGDH-219ENST00000641513 DZIP3Q86Y13 1208 aaKnown RBP10.92□□□□□ -0.66
PHGDH-219ENST00000641513 CCDC191Q8NCU4 936 aa10.92□□□□□ -0.66
PHGDH-219ENST00000641513 TBC1D2BQ9UPU7 963 aa10.92□□□□□ -0.66
PHGDH-219ENST00000641513 CHMP3Q9Y3E7 222 aa10.92□□□□□ -0.66
PHGDH-219ENST00000641513 CASZ1Q86V15 1759 aa10.92□□□□□ -0.66
PHGDH-219ENST00000641513 ONECUT3O60422 494 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-219ENST00000641513 GPTP24298 496 aa10.91□□□□□ -0.66
PHGDH-219ENST00000641513 KCNQ4P56696 695 aa10.91□□□□□ -0.66
PHGDH-219ENST00000641513 INTS5Q6P9B9 1019 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms