RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 NGLY1Q96IV0 654 aa20.35■□□□□ 0.85
PHGDH-216ENST00000641375 MYD88Q99836 296 aa20.35■□□□□ 0.85
PHGDH-216ENST00000641375 SEC24BO95487 1268 aa20.35■□□□□ 0.85
PHGDH-216ENST00000641375 DDRGK1Q96HY6 314 aa20.35■□□□□ 0.85
PHGDH-216ENST00000641375 SMARCA5O60264 1052 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-216ENST00000641375 RAB11FIP3O75154 756 aa20.34■□□□□ 0.85
PHGDH-216ENST00000641375 C8orf37Q96NL8 207 aa20.34■□□□□ 0.85
PHGDH-216ENST00000641375 A1BGP04217 495 aa20.34■□□□□ 0.85
PHGDH-216ENST00000641375 GCKRQ14397 625 aa20.34■□□□□ 0.85
PHGDH-216ENST00000641375 STARD3NLO95772 234 aa20.33■□□□□ 0.85
PHGDH-216ENST00000641375 HSP90AB4PQ58FF6 505 aa20.33■□□□□ 0.85
PHGDH-216ENST00000641375 C16orf71Q8IYS4 520 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-216ENST00000641375 SYTL4Q96C24 671 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-216ENST00000641375 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.84
PHGDH-216ENST00000641375 VPS72Q15906 364 aa20.32■□□□□ 0.84
PHGDH-216ENST00000641375 BCL9LQ86UU0 1499 aa20.32■□□□□ 0.84
PHGDH-216ENST00000641375 TTC22Q5TAA0 569 aa20.32■□□□□ 0.84
PHGDH-216ENST00000641375 RBM42Q9BTD8 480 aaKnown RBP20.32■□□□□ 0.84
PHGDH-216ENST00000641375 SURF6O75683 361 aaKnown RBP20.31■□□□□ 0.84
PHGDH-216ENST00000641375 PRIM1P49642 420 aaKnown RBP20.31■□□□□ 0.84
PHGDH-216ENST00000641375 FNBP4Q8N3X1 1017 aaPredicted RBP20.31■□□□□ 0.84
PHGDH-216ENST00000641375 DEKP35659 375 aaKnown RBP20.31■□□□□ 0.84
PHGDH-216ENST00000641375 OSBPL3Q9H4L5 887 aa20.31■□□□□ 0.84
PHGDH-216ENST00000641375 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.3■□□□□ 0.84
PHGDH-216ENST00000641375 DNAJC10Q8IXB1 793 aa20.29■□□□□ 0.84
PHGDH-216ENST00000641375 SUCLG2Q96I99 432 aa20.29■□□□□ 0.84
PHGDH-216ENST00000641375 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
PHGDH-216ENST00000641375 MARCH10Q8NA82 808 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-216ENST00000641375 OTUD7AQ8TE49 926 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-216ENST00000641375 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
PHGDH-216ENST00000641375 GSPT1P15170 499 aaKnown RBP20.28■□□□□ 0.84
PHGDH-216ENST00000641375 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
PHGDH-216ENST00000641375 KIF1BPQ96EK5 621 aa20.28■□□□□ 0.84
PHGDH-216ENST00000641375 COL15A1P39059 1388 aa20.28■□□□□ 0.84
PHGDH-216ENST00000641375 BICC1Q9H694 974 aaKnown RBP20.28■□□□□ 0.84
PHGDH-216ENST00000641375 PDE1AP54750 535 aa20.27■□□□□ 0.84
PHGDH-216ENST00000641375 KAZALD1Q96I82 304 aa20.27■□□□□ 0.84
PHGDH-216ENST00000641375 TBC1D32Q96NH3 1257 aa20.27■□□□□ 0.84
PHGDH-216ENST00000641375 CDC45O75419 566 aa20.27■□□□□ 0.83
PHGDH-216ENST00000641375 SALL3Q9BXA9 1300 aa20.26■□□□□ 0.83
PHGDH-216ENST00000641375 RHPN1Q8TCX5 695 aa20.26■□□□□ 0.83
PHGDH-216ENST00000641375 ATP5J2-PTCD1G3V325 749 aa20.25■□□□□ 0.83
PHGDH-216ENST00000641375 MX1P20591 662 aa20.25■□□□□ 0.83
PHGDH-216ENST00000641375 FAM98CQ17RN3 349 aaKnown RBP20.25■□□□□ 0.83
PHGDH-216ENST00000641375 ERC1Q8IUD2 1116 aa20.25■□□□□ 0.83
PHGDH-216ENST00000641375 A0A087WZG4 1122 aa20.25■□□□□ 0.83
PHGDH-216ENST00000641375 MFAP1P55081 439 aaKnown RBP20.25■□□□□ 0.83
PHGDH-216ENST00000641375 USP21Q9UK80 565 aa20.25■□□□□ 0.83
PHGDH-216ENST00000641375 TJP1Q07157 1748 aa20.24■□□□□ 0.83
PHGDH-216ENST00000641375 CYP19A1P11511 503 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-216ENST00000641375 OS9Q13438 667 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-216ENST00000641375 KIF6Q6ZMV9 814 aa20.24■□□□□ 0.83
PHGDH-216ENST00000641375 CCDC191Q8NCU4 936 aa20.24■□□□□ 0.83
PHGDH-216ENST00000641375 SLC4A9Q96Q91 983 aa20.24■□□□□ 0.83
PHGDH-216ENST00000641375 ZBTB3Q9H5J0 574 aa20.24■□□□□ 0.83
PHGDH-216ENST00000641375 CWC25Q9NXE8 425 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-216ENST00000641375 TBC1D9Q6ZT07 1266 aa20.24■□□□□ 0.83
PHGDH-216ENST00000641375 UBE3BQ7Z3V4 1068 aa20.24■□□□□ 0.83
PHGDH-216ENST00000641375 STAP2Q9UGK3 403 aa20.24■□□□□ 0.83
PHGDH-216ENST00000641375 AOX1Q06278 1338 aa20.23■□□□□ 0.83
PHGDH-216ENST00000641375 ACSBG1Q96GR2 724 aa20.22■□□□□ 0.83
PHGDH-216ENST00000641375 CASC1Q6TDU7 716 aa20.22■□□□□ 0.83
PHGDH-216ENST00000641375 C22orf23Q9BZE7 217 aa20.22■□□□□ 0.83
PHGDH-216ENST00000641375 IL1RAPL2Q9NP60 686 aa20.22■□□□□ 0.83
PHGDH-216ENST00000641375 ZNF330Q9Y3S2 320 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-216ENST00000641375 A0A0G2JS52 829 aa20.21■□□□□ 0.83
PHGDH-216ENST00000641375 H7C1W4 665 aa20.21■□□□□ 0.83
PHGDH-216ENST00000641375 SDSP20132 328 aa20.21■□□□□ 0.83
PHGDH-216ENST00000641375 CICQ96RK0 1608 aaPredicted RBP20.21■□□□□ 0.83
PHGDH-216ENST00000641375 TUBGCP6Q96RT7 1819 aa20.21■□□□□ 0.83
PHGDH-216ENST00000641375 HSPA1LP34931 641 aa20.21■□□□□ 0.83
PHGDH-216ENST00000641375 CASP7P55210 303 aa20.21■□□□□ 0.83
PHGDH-216ENST00000641375 RABL6Q3YEC7 729 aaPredicted RBP20.21■□□□□ 0.83
PHGDH-216ENST00000641375 MEX3CQ5U5Q3 659 aaKnown RBP20.21■□□□□ 0.83
PHGDH-216ENST00000641375 TCIRG1Q13488 830 aa20.2■□□□□ 0.82
PHGDH-216ENST00000641375 SMARCC1Q92922 1105 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-216ENST00000641375 DAXXQ9UER7 740 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-216ENST00000641375 G3BP1Q13283 466 aaKnown RBP eCLIP20.19■□□□□ 0.829e-7■■■□□ 18.4
PHGDH-216ENST00000641375 CLASRPQ8N2M8 674 aaKnown RBP20.19■□□□□ 0.82
PHGDH-216ENST00000641375 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-216ENST00000641375 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
PHGDH-216ENST00000641375 EPHA10Q5JZY3 1008 aa20.19■□□□□ 0.82
PHGDH-216ENST00000641375 ISCA1Q9BUE6 129 aa20.19■□□□□ 0.82
PHGDH-216ENST00000641375 PA2G4Q9UQ80 394 aaKnown RBP20.19■□□□□ 0.82
PHGDH-216ENST00000641375 MAP3K15Q6ZN16 1313 aa20.19■□□□□ 0.82
PHGDH-216ENST00000641375 THSD7AQ9UPZ6 1657 aa20.18■□□□□ 0.82
PHGDH-216ENST00000641375 ZBTB1Q9Y2K1 713 aa20.18■□□□□ 0.82
PHGDH-216ENST00000641375 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
PHGDH-216ENST00000641375 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
PHGDH-216ENST00000641375 SIK1P57059 783 aa20.17■□□□□ 0.82
PHGDH-216ENST00000641375 HSP90AB3PQ58FF7 597 aa20.17■□□□□ 0.82
PHGDH-216ENST00000641375 PALLDQ8WX93 1383 aa20.17■□□□□ 0.82
PHGDH-216ENST00000641375 GIGYF2Q6Y7W6 1299 aaKnown RBP20.17■□□□□ 0.82
PHGDH-216ENST00000641375 ANO8Q9HCE9 1232 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-216ENST00000641375 COPRSQ9NQ92 184 aa20.17■□□□□ 0.82
PHGDH-216ENST00000641375 ZNF831Q5JPB2 1677 aa20.16■□□□□ 0.82
PHGDH-216ENST00000641375 RBM25P49756 843 aaKnown RBP20.16■□□□□ 0.82
PHGDH-216ENST00000641375 NUTM1Q86Y26 1132 aa20.16■□□□□ 0.82
PHGDH-216ENST00000641375 JARID2Q92833 1246 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-216ENST00000641375 ANKRD36CQ5JPF3 1778 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms