RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 NEURL1BA8MQ27 555 aa22.75■■□□□ 1.23
PHGDH-209ENST00000641074 CYP19A1P11511 503 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-209ENST00000641074 IBTKQ9P2D0 1353 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-209ENST00000641074 GRM8O00222 908 aa22.74■■□□□ 1.23
PHGDH-209ENST00000641074 UTYO14607 1347 aa22.74■■□□□ 1.23
PHGDH-209ENST00000641074 TJP1Q07157 1748 aa22.73■■□□□ 1.23
PHGDH-209ENST00000641074 ONECUT3O60422 494 aaPredicted RBP22.73■■□□□ 1.23
PHGDH-209ENST00000641074 FAM161AQ3B820 660 aa22.73■■□□□ 1.23
PHGDH-209ENST00000641074 GCKRQ14397 625 aa22.72■■□□□ 1.23
PHGDH-209ENST00000641074 C8orf34Q49A92 452 aa22.71■■□□□ 1.23
PHGDH-209ENST00000641074 PPP1R42Q7Z4L9 355 aa22.71■■□□□ 1.23
PHGDH-209ENST00000641074 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
PHGDH-209ENST00000641074 SSH3Q8TE77 659 aa22.71■■□□□ 1.23
PHGDH-209ENST00000641074 QTRT2Q9H974 415 aaKnown RBP22.71■■□□□ 1.23
PHGDH-209ENST00000641074 PALLDQ8WX93 1383 aa22.7■■□□□ 1.22
PHGDH-209ENST00000641074 LOC102724428A0A0B4J2F2 783 aa22.7■■□□□ 1.22
PHGDH-209ENST00000641074 ATP5J2-PTCD1G3V325 749 aa22.7■■□□□ 1.22
PHGDH-209ENST00000641074 SIK1P57059 783 aa22.7■■□□□ 1.22
PHGDH-209ENST00000641074 ZBTB3Q9H5J0 574 aa22.7■■□□□ 1.22
PHGDH-209ENST00000641074 HDAC5Q9UQL6 1122 aa22.7■■□□□ 1.22
PHGDH-209ENST00000641074 ZNF330Q9Y3S2 320 aaPredicted RBP22.7■■□□□ 1.22
PHGDH-209ENST00000641074 POLA2Q14181 598 aa22.69■■□□□ 1.22
PHGDH-209ENST00000641074 SMARCC1Q92922 1105 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-209ENST00000641074 APBB1O00213 710 aa22.68■■□□□ 1.22
PHGDH-209ENST00000641074 ATP6V1AP38606 617 aa22.68■■□□□ 1.22
PHGDH-209ENST00000641074 SUCLG2Q96I99 432 aa22.68■■□□□ 1.22
PHGDH-209ENST00000641074 EXOC6BQ9Y2D4 811 aa22.68■■□□□ 1.22
PHGDH-209ENST00000641074 ZBTB1Q9Y2K1 713 aa22.68■■□□□ 1.22
PHGDH-209ENST00000641074 AFDNP55196 1824 aaKnown RBP22.68■■□□□ 1.22
PHGDH-209ENST00000641074 SRGAP3O43295 1099 aa22.68■■□□□ 1.22
PHGDH-209ENST00000641074 FAM182BQ5T319 152 aa22.68■■□□□ 1.22
PHGDH-209ENST00000641074 KAZALD1Q96I82 304 aa22.68■■□□□ 1.22
PHGDH-209ENST00000641074 MTX1Q13505 466 aa22.67■■□□□ 1.22
PHGDH-209ENST00000641074 SEPT12Q8IYM1 358 aa22.67■■□□□ 1.22
PHGDH-209ENST00000641074 SMARCA5O60264 1052 aaPredicted RBP22.66■■□□□ 1.22
PHGDH-209ENST00000641074 PTF1AQ7RTS3 328 aa22.66■■□□□ 1.22
PHGDH-209ENST00000641074 ZBTB47Q9UFB7 747 aaPredicted RBP22.66■■□□□ 1.22
PHGDH-209ENST00000641074 ITPK1Q13572 414 aa22.66■■□□□ 1.22
PHGDH-209ENST00000641074 KIF6Q6ZMV9 814 aa22.66■■□□□ 1.22
PHGDH-209ENST00000641074 C16orf71Q8IYS4 520 aaPredicted RBP22.64■■□□□ 1.22
PHGDH-209ENST00000641074 BICC1Q9H694 974 aaKnown RBP22.64■■□□□ 1.22
PHGDH-209ENST00000641074 CICQ96RK0 1608 aaPredicted RBP22.64■■□□□ 1.21
PHGDH-209ENST00000641074 A0A087WZG4 1122 aa22.63■■□□□ 1.21
PHGDH-209ENST00000641074 IL6STP40189 918 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-209ENST00000641074 INTS5Q6P9B9 1019 aaKnown RBP22.63■■□□□ 1.21
PHGDH-209ENST00000641074 JARID2Q92833 1246 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-209ENST00000641074 BCL11AQ9H165 835 aa22.63■■□□□ 1.21
PHGDH-209ENST00000641074 UBE3BQ7Z3V4 1068 aa22.63■■□□□ 1.21
PHGDH-209ENST00000641074 ARXQ96QS3 562 aa22.63■■□□□ 1.21
PHGDH-209ENST00000641074 CCDC87Q9NVE4 849 aa22.63■■□□□ 1.21
PHGDH-209ENST00000641074 CWC25Q9NXE8 425 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-209ENST00000641074 MAP3K15Q6ZN16 1313 aa22.62■■□□□ 1.21
PHGDH-209ENST00000641074 NHSQ6T4R5 1651 aa22.62■■□□□ 1.21
PHGDH-209ENST00000641074 CRKLP46109 303 aaKnown RBP22.62■■□□□ 1.21
PHGDH-209ENST00000641074 TCIRG1Q13488 830 aa22.62■■□□□ 1.21
PHGDH-209ENST00000641074 SURF6O75683 361 aaKnown RBP22.61■■□□□ 1.21
PHGDH-209ENST00000641074 CASP7P55210 303 aa22.61■■□□□ 1.21
PHGDH-209ENST00000641074 PLEKHM2Q8IWE5 1019 aa22.61■■□□□ 1.21
PHGDH-209ENST00000641074 CCDC191Q8NCU4 936 aa22.61■■□□□ 1.21
PHGDH-209ENST00000641074 ISCA1Q9BUE6 129 aa22.61■■□□□ 1.21
PHGDH-209ENST00000641074 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
PHGDH-209ENST00000641074 H7C1W4 665 aa22.61■■□□□ 1.21
PHGDH-209ENST00000641074 EPHA10Q5JZY3 1008 aa22.61■■□□□ 1.21
PHGDH-209ENST00000641074 OTUD7AQ8TE49 926 aaPredicted RBP22.61■■□□□ 1.21
PHGDH-209ENST00000641074 EIF5P55010 431 aaKnown RBP22.6■■□□□ 1.21
PHGDH-209ENST00000641074 BTAF1O14981 1849 aa22.6■■□□□ 1.21
PHGDH-209ENST00000641074 COL15A1P39059 1388 aa22.59■■□□□ 1.21
PHGDH-209ENST00000641074 ZNF831Q5JPB2 1677 aa22.59■■□□□ 1.21
PHGDH-209ENST00000641074 HLFQ16534 295 aa22.59■■□□□ 1.21
PHGDH-209ENST00000641074 GIGYF2Q6Y7W6 1299 aaKnown RBP22.59■■□□□ 1.21
PHGDH-209ENST00000641074 RREB1Q92766 1687 aa22.59■■□□□ 1.21
PHGDH-209ENST00000641074 RAB11FIP3O75154 756 aa22.58■■□□□ 1.21
PHGDH-209ENST00000641074 NOP58Q9Y2X3 529 aaKnown RBP22.58■■□□□ 1.21
PHGDH-209ENST00000641074 TRIM28Q13263 835 aaKnown RBP22.58■■□□□ 1.2
PHGDH-209ENST00000641074 NPM2Q86SE8 214 aaKnown RBP22.58■■□□□ 1.2
PHGDH-209ENST00000641074 DZIP3Q86Y13 1208 aaKnown RBP22.58■■□□□ 1.2
PHGDH-209ENST00000641074 TBC1D2BQ9UPU7 963 aa22.58■■□□□ 1.2
PHGDH-209ENST00000641074 COL5A3P25940 1745 aaPredicted RBP22.57■■□□□ 1.2
PHGDH-209ENST00000641074 BMP2KLQ5H9B9 411 aa22.57■■□□□ 1.2
PHGDH-209ENST00000641074 MYH14Q7Z406 1995 aaKnown RBP22.57■■□□□ 1.2
PHGDH-209ENST00000641074 SBF2Q86WG5 1849 aa22.56■■□□□ 1.2
PHGDH-209ENST00000641074 ERVV-1B6SEH8 477 aa22.55■■□□□ 1.2
PHGDH-209ENST00000641074 KCNQ4P56696 695 aa22.55■■□□□ 1.2
PHGDH-209ENST00000641074 RABL6Q3YEC7 729 aaPredicted RBP22.55■■□□□ 1.2
PHGDH-209ENST00000641074 HSP90AB4PQ58FF6 505 aa22.55■■□□□ 1.2
PHGDH-209ENST00000641074 RTL5Q5HYW3 569 aaPredicted RBP22.55■■□□□ 1.2
PHGDH-209ENST00000641074 LINC00116Q8NCU8 138 aa22.55■■□□□ 1.2
PHGDH-209ENST00000641074 PA2G4Q9UQ80 394 aaKnown RBP22.55■■□□□ 1.2
PHGDH-209ENST00000641074 RHPN1Q8TCX5 695 aa22.55■■□□□ 1.2
PHGDH-209ENST00000641074 HSP90AB3PQ58FF7 597 aa22.54■■□□□ 1.2
PHGDH-209ENST00000641074 ZNF772Q68DY9 489 aaPredicted RBP22.54■■□□□ 1.2
PHGDH-209ENST00000641074 SEC24BO95487 1268 aa22.53■■□□□ 1.2
PHGDH-209ENST00000641074 FOXO4P98177 505 aa22.53■■□□□ 1.2
PHGDH-209ENST00000641074 KIF1BPQ96EK5 621 aa22.53■■□□□ 1.2
PHGDH-209ENST00000641074 IL1RAPL2Q9NP60 686 aa22.53■■□□□ 1.2
PHGDH-209ENST00000641074 SALL3Q9BXA9 1300 aa22.53■■□□□ 1.2
PHGDH-209ENST00000641074 GSPT1P15170 499 aaKnown RBP22.52■■□□□ 1.2
PHGDH-209ENST00000641074 GPTP24298 496 aa22.52■■□□□ 1.2
PHGDH-209ENST00000641074 OS9Q13438 667 aaPredicted RBP22.52■■□□□ 1.2
PHGDH-209ENST00000641074 TTC22Q5TAA0 569 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms