RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	GSPT1	P15170	499 aa	Known RBP	13.95	□□□□□ -0.18
GFAP-238	ENST00000640859	KSR2	Q6VAB6	950 aa		13.95	□□□□□ -0.18
GFAP-238	ENST00000640859	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.95	□□□□□ -0.18
GFAP-238	ENST00000640859	SSH3	Q8TE77	659 aa		13.95	□□□□□ -0.18
GFAP-238	ENST00000640859	DAXX	Q9UER7	740 aa	Predicted RBP	13.95	□□□□□ -0.18
GFAP-238	ENST00000640859	DISP2	A7MBM2	1401 aa		13.95	□□□□□ -0.18
GFAP-238	ENST00000640859	TBC1D9	Q6ZT07	1266 aa		13.94	□□□□□ -0.18
GFAP-238	ENST00000640859	OSBPL3	Q9H4L5	887 aa		13.94	□□□□□ -0.18
GFAP-238	ENST00000640859	CDC45	O75419	566 aa		13.93	□□□□□ -0.18
GFAP-238	ENST00000640859	RBM25	P49756	843 aa	Known RBP	13.93	□□□□□ -0.18
GFAP-238	ENST00000640859	BECN1	Q14457	450 aa		13.93	□□□□□ -0.18
GFAP-238	ENST00000640859	NKX1-1	Q15270	411 aa	Predicted RBP	13.93	□□□□□ -0.18
GFAP-238	ENST00000640859	ZNF496	Q96IT1	587 aa	Predicted RBP	13.93	□□□□□ -0.18
GFAP-238	ENST00000640859	MAP3K2	Q9Y2U5	619 aa		13.93	□□□□□ -0.18
GFAP-238	ENST00000640859	THSD7A	Q9UPZ6	1657 aa		13.93	□□□□□ -0.18
GFAP-238	ENST00000640859	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.93	□□□□□ -0.18
GFAP-238	ENST00000640859	SHANK3	Q9BYB0	1731 aa		13.93	□□□□□ -0.18
GFAP-238	ENST00000640859	SALL3	Q9BXA9	1300 aa		13.92	□□□□□ -0.18
GFAP-238	ENST00000640859	APBB1	O00213	710 aa		13.92	□□□□□ -0.18
GFAP-238	ENST00000640859	SNRPA1	P09661	255 aa	Known RBP	13.92	□□□□□ -0.18
GFAP-238	ENST00000640859	CABP4	P57796	275 aa		13.92	□□□□□ -0.18
GFAP-238	ENST00000640859	EXOC6B	Q9Y2D4	811 aa		13.92	□□□□□ -0.18
GFAP-238	ENST00000640859	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.91	□□□□□ -0.18
GFAP-238	ENST00000640859	PPP1R42	Q7Z4L9	355 aa		13.91	□□□□□ -0.18
GFAP-238	ENST00000640859	MARCH10	Q8NA82	808 aa	Predicted RBP	13.91	□□□□□ -0.18
GFAP-238	ENST00000640859	SYTL4	Q96C24	671 aa	Predicted RBP	13.91	□□□□□ -0.18
GFAP-238	ENST00000640859	FMNL2	Q96PY5	1086 aa		13.91	□□□□□ -0.18
GFAP-238	ENST00000640859	LRRCC1	Q9C099	1032 aa		13.91	□□□□□ -0.18
GFAP-238	ENST00000640859	SPDYE4	A6NLX3	237 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	ERVV-2	B6SEH9	535 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	EIF5B	O60841	1220 aa	Known RBP	13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	RAB11FIP3	O75154	756 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	DDX58	O95786	925 aa	Known RBP	13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	HMGB2	P26583	209 aa	Known RBP	13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	PDE1A	P54750	535 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	FAM182B	Q5T319	152 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	LRP10	Q7Z4F1	713 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	TTC5	Q8N0Z6	440 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	LINS1	Q8NG48	757 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	USP16	Q9Y5T5	823 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	TUBGCP6	Q96RT7	1819 aa		13.9	□□□□□ -0.18
GFAP-238	ENST00000640859	UTY	O14607	1347 aa		13.9	□□□□□ -0.19
GFAP-238	ENST00000640859	LAMB4	A4D0S4	1761 aa		13.89	□□□□□ -0.19
GFAP-238	ENST00000640859	SOCS7	O14512	581 aa		13.89	□□□□□ -0.19
GFAP-238	ENST00000640859	SDS	P20132	328 aa		13.89	□□□□□ -0.19
GFAP-238	ENST00000640859	BAG6	P46379	1132 aa		13.89	□□□□□ -0.19
GFAP-238	ENST00000640859	MTX1	Q13505	466 aa		13.89	□□□□□ -0.19
GFAP-238	ENST00000640859	TBC1D2	Q9BYX2	928 aa		13.89	□□□□□ -0.19
GFAP-238	ENST00000640859	STAP2	Q9UGK3	403 aa		13.89	□□□□□ -0.19
GFAP-238	ENST00000640859	UBR2	Q8IWV8	1755 aa		13.88	□□□□□ -0.19
GFAP-238	ENST00000640859	TRIM37	O94972	964 aa		13.88	□□□□□ -0.19
GFAP-238	ENST00000640859	XAGE3	Q8WTP9	111 aa		13.88	□□□□□ -0.19
GFAP-238	ENST00000640859	HDAC5	Q9UQL6	1122 aa		13.88	□□□□□ -0.19
GFAP-238	ENST00000640859	PAPPA	Q13219	1627 aa		13.88	□□□□□ -0.19
GFAP-238	ENST00000640859	NBR1	Q14596	966 aa		13.87	□□□□□ -0.19
GFAP-238	ENST00000640859	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.87	□□□□□ -0.19
GFAP-238	ENST00000640859	BCL9	O00512	1426 aa		13.87	□□□□□ -0.19
GFAP-238	ENST00000640859	WNK3	Q9BYP7	1800 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	SRGAP3	O43295	1099 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	SURF6	O75683	361 aa	Known RBP	13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	APBA3	O96018	575 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	IGKV5-2	P06315	115 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	AIMP1	Q12904	312 aa	Known RBP	13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	CWF19L2	Q2TBE0	894 aa	Known RBP	13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	COPS6	Q7L5N1	327 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	RIC3	Q7Z5B4	369 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	ACSBG1	Q96GR2	724 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	METTL22	Q9BUU2	404 aa	Predicted RBP	13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	TMOD3	Q9NYL9	352 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	AOX1	Q06278	1338 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	ERBB4	Q15303	1308 aa		13.86	□□□□□ -0.19
GFAP-238	ENST00000640859	KCP	Q6ZWJ8	1503 aa		13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	GRM8	O00222	908 aa		13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	MYL6B	P14649	208 aa		13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	MX1	P20591	662 aa		13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	HSP90AB4P	Q58FF6	505 aa		13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	RHPN1	Q8TCX5	695 aa		13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	SNX21	Q969T3	373 aa		13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	KIF2C	Q99661	725 aa		13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	BCL11A	Q9H165	835 aa		13.85	□□□□□ -0.19
GFAP-238	ENST00000640859	KIF1BP	Q96EK5	621 aa		13.84	□□□□□ -0.19
GFAP-238	ENST00000640859	KAZALD1	Q96I82	304 aa		13.84	□□□□□ -0.19
GFAP-238	ENST00000640859	SUCLG2	Q96I99	432 aa		13.84	□□□□□ -0.19
GFAP-238	ENST00000640859	TOGARAM1	Q9Y4F4	1720 aa		13.84	□□□□□ -0.19
GFAP-238	ENST00000640859	NEURL1B	A8MQ27	555 aa		13.83	□□□□□ -0.2
GFAP-238	ENST00000640859	PRIM1	P49642	420 aa	Known RBP	13.83	□□□□□ -0.2
GFAP-238	ENST00000640859	ANKRD13D	Q6ZTN6	518 aa		13.83	□□□□□ -0.2
GFAP-238	ENST00000640859	SMARCC1	Q92922	1105 aa	Predicted RBP	13.83	□□□□□ -0.2
GFAP-238	ENST00000640859	USP26	Q9BXU7	913 aa		13.83	□□□□□ -0.2
GFAP-238	ENST00000640859	ANTXR1	Q9H6X2	564 aa		13.83	□□□□□ -0.2
GFAP-238	ENST00000640859	BRWD3	Q6RI45	1802 aa		13.83	□□□□□ -0.2
GFAP-238	ENST00000640859	ARFGEF2	Q9Y6D5	1785 aa		13.82	□□□□□ -0.2
GFAP-238	ENST00000640859	NEXN	Q0ZGT2	675 aa		13.82	□□□□□ -0.2
GFAP-238	ENST00000640859	GCKR	Q14397	625 aa		13.82	□□□□□ -0.2
GFAP-238	ENST00000640859	CASC1	Q6TDU7	716 aa		13.82	□□□□□ -0.2
GFAP-238	ENST00000640859	MYD88	Q99836	296 aa		13.82	□□□□□ -0.2
GFAP-238	ENST00000640859	IL1RAPL2	Q9NP60	686 aa		13.82	□□□□□ -0.2
GFAP-238	ENST00000640859	AFDN	P55196	1824 aa	Known RBP	13.81	□□□□□ -0.2

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